RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 WDR74Q6RFH5 385 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 APOOLQ6UXV4 268 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 CD300LDQ6UXZ3 194 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TFAP2EQ6VUC0 442 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 ZNF782Q6ZMW2 699 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 DOLPP1Q86YN1 238 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 C1QL4Q86Z23 238 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 C9orf40Q8IXQ3 194 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MS4A15Q8N5U1 240 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 KIR3DL3Q8N743 410 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 ZNF676Q8N7Q3 588 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 ZNF439Q8NDP4 499 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR11H4Q8NGC9 324 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR4K5Q8NGD3 323 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR8D4Q8NGM9 314 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR1B1Q8NGR6 318 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TERB2Q8NHR7 220 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 PFN4Q8NHR9 129 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SLC7A13Q8TCU3 470 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 HAVCR2Q8TDQ0 301 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 RNF138Q8WVD3 245 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 DNAJA3Q96EY1 480 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 NARS2Q96I59 477 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 TBX5Q99593 518 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MCHR1Q99705 422 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MDFIQ99750 246 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SYT3Q9BQG1 590 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 PRSS27Q9BQR3 290 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR8D2Q9GZM6 311 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 VN1R1Q9GZP7 353 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 RNF121Q9H920 327 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MSL2Q9HCI7 577 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TPSG1Q9NRR2 321 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SLC7A10Q9NS82 523 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 FAM206AQ9NX38 181 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SIGLEC8Q9NYZ4 499 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TECRQ9NZ01 308 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 CALML5Q9NZT1 146 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR1A1Q9P1Q5 309 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 RCC2Q9P258 522 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 POU2F3Q9UKI9 436 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SLC7A7Q9UM01 511 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 KLHDC2Q9Y2U9 406 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TMED3Q9Y3Q3 217 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 LSM5Q9Y4Y9 91 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 VCANP13611 3396 aa3.03□□□□□ -1.93
SMG6-208ENST00000570874 IQCMA0A1B0GVH7 501 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 A0A1W2PNU3 283 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 C20orf202A1L168 122 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CXorf65A6NEN9 183 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 OR5H14A6NHG9 310 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 B4DXG7 233 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 D6RAR5 112 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 F5H697 171 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 NPIPB9F8W1W9 429 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 H3BS24 57 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CDC42EP2O14613 210 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CDX4O14627 284 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 SH2D1BO14796 132 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TCF21O43680 179 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TRIAP1O43715 76 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SYNGR1O43759 233 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ICOSLGO75144 302 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SCRG1O75711 98 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SLC22A5O76082 557 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SLC2A10O95528 541 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CA1P00915 261 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 HBE1P02100 147 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 IGKV3-11P04433 115 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 DBIP07108 87 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 CSF3P09919 207 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZGLP1P0C6A0 271 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ADORA3P0DMS8 318 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 VSIG10L2P0DP72 767 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CD59P13987 128 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ABOP16442 354 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 RPL12P30050 165 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 SFTPDP35247 375 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TGFBR1P36897 503 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 LGALS7P47929 136 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FXYD6P3P58550 94 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TAS2R43P59537 309 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 SNRPGP62308 76 aaKnown RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 PAFAH1B2P68402 229 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 TGFBR3Q03167 851 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CD164Q04900 197 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CD300CQ08708 224 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FOXL1Q12952 345 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 MFAP5Q13361 173 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 QPRTQ15274 297 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CD226Q15762 336 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ISXQ2M1V0 245 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 LRRC75BQ2VPJ9 315 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 ZFP69Q49AA0 526 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 CLEC12AQ5QGZ9 265 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 FNDC7Q5VTL7 733 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 RSBN1Q5VWQ0 802 aaPredicted RBP3.02□□□□□ -1.93
SMG6-208ENST00000570874 C12orf73Q69YU5 71 aa3.02□□□□□ -1.93
SMG6-208ENST00000570874 LEG1Q6P5S2 330 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms