RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 MEF2CQ06413 473 aaPredicted RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 MADCAM1Q13477 382 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 ARFRP1Q13795 201 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 IL18Q14116 193 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 ZNF79Q15937 498 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 MOB1BQ7L9L4 216 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 TCF23Q7RTU1 214 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 SNX29P2Q8IUI4 249 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 C8orf46Q8TAG6 207 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 SMIM4Q8WVI0 70 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 NUDCD2Q8WVJ2 157 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 GCDHQ92947 438 aaPredicted RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 CMSS1Q9BQ75 279 aaKnown RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 HDHD3Q9BSH5 251 aaPredicted RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 DCTN5Q9BTE1 182 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 REG4Q9BYZ8 158 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 RIMS4Q9H426 269 aaPredicted RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 SCPEP1Q9HB40 452 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 C19orf12Q9NSK7 152 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 MBNL3Q9NUK0 354 aaKnown RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 KIF25Q9UIL4 384 aa8.63□□□□□ -1.03
CDH3-210ENST00000569117 ELF5Q9UKW6 265 aaPredicted RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 MRPS7Q9Y2R9 242 aaKnown RBP8.63□□□□□ -1.03
CDH3-210ENST00000569117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDH3-210ENST00000569117 C22orf46C9J442 243 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 FAM157AC9JC47 383 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 SULT1C2O00338 296 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 PHF1O43189 567 aaPredicted RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 FOXH1O75593 365 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 MT-ND4P03905 459 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 AMY2AP04746 511 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 LPLP06858 475 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 INHBBP09529 407 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 PTHLHP12272 177 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 PRSS3P35030 304 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 GLIPR1P48060 266 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 RPL11P62913 178 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 MRPS15P82914 257 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 ZNF45Q02386 682 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 CR1LQ2VPA4 569 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 CD276Q5ZPR3 534 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 ZNF880Q6PDB4 577 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 Q6ZPA2 131 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 BTN2A1Q7KYR7 527 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 TPRX1Q8N7U7 411 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 GPX8Q8TED1 209 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 S100ZQ8WXG8 99 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 H1FXQ92522 213 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 DACT3Q96B18 629 aaPredicted RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 OR6C3Q9NZP0 311 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 RPUSD1Q9UJJ7 312 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 ANAPC10Q9UM13 185 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 LINC00312Q9Y6C7 94 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
CDH3-210ENST00000569117 FLNAP21333 2647 aaKnown RBP8.62□□□□□ -1.03
CDH3-210ENST00000569117 OTOGQ6ZRI0 2925 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 MEIKINA0A087WXM9 373 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 TRGV10A0A0A0MS01 117 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 hADV38S2A0JD32 116 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 MEIOCA2RUB1 952 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 GABARAPH6UMI1 98 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 ENSAO43768 121 aaKnown RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 ZFP36P26651 326 aaKnown RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 GLP1RP43220 463 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 CBX5P45973 191 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 DGCR2P98153 550 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 PAX2Q02962 417 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 SRSF7Q16629 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDH3-210ENST00000569117 C6orf183Q5T699 404 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 TRAT1Q6PIZ9 186 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 Q6ZS49 121 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 TRAPPC6BQ86SZ2 158 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 LY6G5BQ8NDX9 201 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 OR4K15Q8NH41 348 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 CORO2AQ92828 525 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 WDR12Q9GZL7 423 aaKnown RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 SRRQ9GZT4 340 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 CHMP1AQ9HD42 196 aaPredicted RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 ING3Q9NXR8 418 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 TRAPPC2LQ9UL33 140 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 MGAT4AQ9UM21 535 aa8.61□□□□□ -1.03
CDH3-210ENST00000569117 UBE2J1Q9Y385 318 aaPredicted RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 RBMX2Q9Y388 322 aaKnown RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
CDH3-210ENST00000569117 LOC105371242A0A075B767 164 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 PPIAL4CA0A0B4J2A2 164 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 IGHV2-70DA0A0C4DH43 119 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 ZNF729A6NN14 1252 aaPredicted RBP8.6□□□□□ -1.03
CDH3-210ENST00000569117 B4DSR2 109 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 RBP4P02753 201 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 MSMBP08118 114 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 ACTBP60709 375 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 ACTG1P63261 375 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 HLA-DRB3P79483 266 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms