RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PSG2P11465 335 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IRF2P14316 349 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 PRDX2P32119 198 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SERPINF1P36955 418 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 AP2S1P53680 142 aaPredicted RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 HLA-DRB3P79483 266 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IFITM2Q01629 132 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 DHODHQ02127 395 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ANKRD55Q3KP44 614 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 KRBOX4Q5JUW0 171 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 LAMTOR1Q6IAA8 161 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ZNF497Q6ZNH5 498 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 LILRB4Q8NHJ6 448 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 MOB3AQ96BX8 217 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 TAF9BQ9HBM6 251 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 GCM1Q9NP62 436 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 DYNLRB1Q9NP97 96 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 DECR2Q9NUI1 292 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 RASL12Q9NYN1 266 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 KCNIP1Q9NZI2 227 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 PPP1R3CQ9UQK1 317 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 WIPI2Q9Y4P8 454 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 TMEM30CPA0ZSE6 113 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CTXN2P0C2S0 81 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 OR5AC1P0C628 307 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CD80P33681 288 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 PLA2G5P39877 138 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 PCSK4Q6UW60 755 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 GSG1LQ6UXU4 331 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 Q6ZS49 121 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 TGIF2LYQ8IUE0 185 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SLC38A6Q8IZM9 456 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CD177Q8N6Q3 437 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ZNRF1Q8ND25 227 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 OR4A4PQ8NGN8 299 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 MRGPRDQ8TDS7 321 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SLC5A7Q9GZV3 580 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 DNTTIP1Q9H147 329 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 GSKIPQ9P0R6 139 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 OR1A1Q9P1Q5 309 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IL19Q9UHD0 177 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ZDHHC8Q9ULC8 765 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ARFGEF3Q5TH69 2177 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 IGKV1D-13A0A0B4J2D9 117 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 TMEM8BA6NDV4 472 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 C17orf100A8MU93 164 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 MPTX1A8MV57 137 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 PHF1O43189 567 aaPredicted RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 TNFSF12O43508 249 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 PLAUP00749 431 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 IGKV1-13P0DP09 117 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 OR3A1P47881 315 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 UQCRFS1P47985 274 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 GLIPR1P48060 266 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 EDDM3BP56851 147 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 LTC4SQ16873 150 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 LGALSLQ3ZCW2 172 aaPredicted RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 NCMAPQ5T1S8 102 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 C16orf54Q6UWD8 224 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 MEX3BQ6ZN04 569 aaKnown RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 FAM219AQ8IW50 185 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 PPP1R1CQ8WVI7 109 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 CCL28Q9NRJ3 127 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 RDH8Q9NYR8 311 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 RNF7Q9UBF6 113 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 PCDHB10Q9UN67 800 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 IGKV1D-17A0A075B6S4 117 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 A0A1B0GWJ7 208 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 CRYM-AS1A6NIL9 109 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 SHISA9B4DS77 424 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 E7EQL1 145 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 L7N2F9 121 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 RPS2P15880 293 aaKnown RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 TNFRSF1AP19438 455 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 LMO1P25800 156 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 GNRHRP30968 328 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 IL2RGP31785 369 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 CEACAM6P40199 344 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 SRSF7Q16629 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMG1-215ENST00000568239 LPCAT3Q6P1A2 487 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 ZNF818PQ6ZRF7 136 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 MOB1BQ7L9L4 216 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 FOXRED2Q8IWF2 684 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 GAPTQ8N292 157 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 KDF1Q8NAX2 398 aaPredicted RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 OR10Z1Q8NGY1 313 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 RFESDQ8TAC1 157 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 DHRS9Q9BPW9 319 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 TRAF4Q9BUZ4 470 aaPredicted RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 NAA60Q9H7X0 242 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 SAP30LQ9HAJ7 183 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 DCAF16Q9NXF7 216 aa5.93□□□□□ -1.46
SMG1-215ENST00000568239 CISD1Q9NZ45 108 aaKnown RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 YLPM1P49750 1951 aaKnown RBP5.93□□□□□ -1.46
SMG1-215ENST00000568239 LRBAP50851 2863 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 TRBV6-6A0A0A6YYG2 114 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 IFNL4K9M1U5 179 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 GNLYP22749 145 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 SHEQ5VZ18 495 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms