RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	SPATA24	Q86W54	205 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	ZNF491	Q8N8L2	437 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	C8orf31	Q8N9H6	132 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	OR13C3	Q8NGS6	347 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	RNFT2	Q96EX2	444 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	KCTD7	Q96MP8	289 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	NR1H4	Q96RI1	486 aa	Predicted RBP	8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	CHCHD6	Q9BRQ6	235 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	KLK15	Q9H2R5	256 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	ZCCHC4	Q9H5U6	513 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	GNB4	Q9HAV0	340 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	ISYNA1	Q9NPH2	558 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	BIRC6	Q9NR09	4857 aa		8.84	□□□□□ -0.99
TCF4-238	ENST00000568169	OR4C45	A6NMZ5	311 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	ZNF736	B4DX44	427 aa	Predicted RBP	8.83	□□□□□ -1
TCF4-238	ENST00000568169	C15orf65	H3BRN8	121 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	OR5H8	P0DN80	308 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	SPN	P16150	400 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	GZMH	P20718	246 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	PPIF	P30405	207 aa	Known RBP	8.83	□□□□□ -1
TCF4-238	ENST00000568169	CCR9	P51686	369 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	F2RL1	P55085	397 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	GNGT1	P63211	74 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	FLOT2	Q14254	428 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	IL13RA2	Q14627	380 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	ZNF691	Q5VV52	312 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	PXT1	Q8NFP0	134 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	OR52M1	Q8NGK5	317 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	8.83	□□□□□ -1
TCF4-238	ENST00000568169	DCUN1D4	Q92564	292 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	EME1	Q96AY2	570 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	TM2D3	Q9BRN9	247 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	EDA2R	Q9HAV5	297 aa		8.83	□□□□□ -1
TCF4-238	ENST00000568169	HUWE1	Q7Z6Z7	4374 aa	Known RBP	8.83	□□□□□ -1
TCF4-238	ENST00000568169	OVOL1	O14753	267 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	HTR1A	P08908	422 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	GP9	P14770	177 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	VHL	P40337	213 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	GNB1	P62873	340 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	ZSCAN26	Q16670	478 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	FAM53A	Q6NSI3	398 aa	Predicted RBP	8.82	□□□□□ -1
TCF4-238	ENST00000568169	OR8J1	Q8NGP2	316 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	RFK	Q969G6	155 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	FAM118A	Q9NWS6	357 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	GFOD1	Q9NXC2	390 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	ENOPH1	Q9UHY7	261 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	VSIG4	Q9Y279	399 aa		8.82	□□□□□ -1
TCF4-238	ENST00000568169	FAM90A10P	A6NDY2	464 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	TRIM64C	A6NLI5	447 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169		G3V2T6	193 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	SDCBP	O00560	298 aa	Predicted RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	SLC16A6	O15403	523 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	SULT1B1	O43704	296 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	IGLV1-40	P01703	118 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	IL3RA	P26951	378 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	POLR2I	P36954	125 aa	Known RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	ZNF137P	P52743	207 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	GALE	Q14376	348 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	PIGY	Q3MUY2	71 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169		Q3ZCU0	254 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	TMEM65	Q6PI78	240 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	ASCL4	Q6XD76	172 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	ADAMTSL5	Q6ZMM2	481 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	SERPINA12	Q8IW75	414 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	PARP16	Q8N5Y8	322 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	SUMF2	Q8NBJ7	301 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	OR5D14	Q8NGL3	314 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	DLX4	Q92988	240 aa	Predicted RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	ARL11	Q969Q4	196 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	RBMXL1	Q96E39	390 aa	Known RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	PELI1	Q96FA3	418 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	OR5B12	Q96R08	314 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	DPCD	Q9BVM2	203 aa	Predicted RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	GABARAPL1	Q9H0R8	117 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	CHCHD3	Q9NX63	227 aa	Known RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	ZNF581	Q9P0T4	197 aa		8.81	□□□□□ -1
TCF4-238	ENST00000568169	NKX1-2	Q9UD57	310 aa	Predicted RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	ZNF107	Q9UII5	783 aa	Predicted RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	EPPK1	P58107	5090 aa	Known RBP	8.81	□□□□□ -1
TCF4-238	ENST00000568169	TMEM30CP	A0ZSE6	113 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169		G3V318	75 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169		J3QRE1	110 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	LDLRAD4	O15165	306 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	TXNL1	O43396	289 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	ORC5	O43913	435 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	SAP30	O75446	220 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	VEGFC	P49767	419 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	GYS2	P54840	703 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	ALKBH1	Q13686	389 aa	Known RBP	8.8	□□□□□ -1
TCF4-238	ENST00000568169	ATP6AP1	Q15904	470 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	ACSM6	Q6P461	480 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	SLC25A48	Q6ZT89	311 aa	Known RBP	8.8	□□□□□ -1
TCF4-238	ENST00000568169	OR6Q1	Q8NGQ2	317 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	OR10K1	Q8NGX5	313 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	UBALD1	Q8TB05	177 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	ISOC1	Q96CN7	298 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	CIB1	Q99828	191 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	OR51J1	Q9H342	316 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	IFT22	Q9H7X7	185 aa		8.8	□□□□□ -1
TCF4-238	ENST00000568169	POMP	Q9Y244	141 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms