RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 A0A096LNT2 108 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 TRAV39A0A0B4J263 110 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 MEX3AA1L020 520 aaKnown RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 FOXI3A8MTJ6 420 aaPredicted RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 F5H0A9 414 aaPredicted RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 H3BUI4 141 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 MGST3O14880 152 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 XRCC3O43542 346 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 SCGNO76038 276 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 HEXAP06865 529 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 PTHLHP12272 177 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 HIST1H1DP16402 221 aaKnown RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 TALDO1P37837 337 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 GLIPR1P48060 266 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 TAS2R20P59543 309 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 LCN2P80188 198 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 AESQ08117 197 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 RBM39Q14498 530 aaKnown RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 ZNF260Q3ZCT1 412 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 KRBOX4Q5JUW0 171 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 TMEM69Q5SWH9 247 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 WDR25Q64LD2 544 aaPredicted RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 CNIH2Q6PI25 160 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 Q6ZRM9 215 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 GDPD3Q7L5L3 318 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 OR8H2Q8N162 312 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 OR6Q1Q8NGQ2 317 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 HDHD3Q9BSH5 251 aaPredicted RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 LPAR2Q9HBW0 351 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 ETAA1Q9NY74 926 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 RCC2Q9P258 522 aaKnown RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 CLN8Q9UBY8 286 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 AK3Q9UIJ7 227 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 HSF4Q9ULV5 492 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 KCNK7Q9Y2U2 307 aa6.39□□□□□ -1.39
SMG1-214ENST00000568038 UTP20O75691 2785 aaKnown RBP6.39□□□□□ -1.39
SMG1-214ENST00000568038 MEIKINA0A087WXM9 373 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 A0A0A6YYH2 397 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 TMEM235A6NFC5 223 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 A6NJ64 397 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 FAM157AC9JC47 383 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 H7C1Q1 480 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 MFNGO00587 321 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 GLAP06280 429 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 CD3GP09693 182 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 MNDAP41218 407 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 NPY4RP50391 375 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 MRPS15P82914 257 aaKnown RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 LOXL1Q08397 574 aaPredicted RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 ARFRP1Q13795 201 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 RNASE12Q5GAN4 147 aaKnown RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 RSBN1Q5VWQ0 802 aaPredicted RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 BTN2A1Q7KYR7 527 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 SNX29P2Q8IUI4 249 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 FAM185AQ8N0U4 392 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 CIARTQ8N365 385 aaPredicted RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 OR4K15Q8NH41 348 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 CCDC107Q8WV48 283 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 NUDCD2Q8WVJ2 157 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 COQ2Q96H96 371 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 WDFY2Q96P53 400 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 CMSS1Q9BQ75 279 aaKnown RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 DCTN5Q9BTE1 182 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 CHMP1AQ9HD42 196 aaPredicted RBP6.38□□□□□ -1.39
SMG1-214ENST00000568038 C19orf12Q9NSK7 152 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 KIF25Q9UIL4 384 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 HECTD1Q9ULT8 2610 aa6.38□□□□□ -1.39
SMG1-214ENST00000568038 MALRD1Q5VYJ5 2156 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 ARHGAP32A7KAX9 2087 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 LOC105371242A0A075B767 164 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 A0A0G2JMP0 313 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 A0A0X1KG70 313 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 A0A1W2PQ09 198 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 TMEM30CPA0ZSE6 113 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 FUOMA2VDF0 154 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 FABP12A6NFH5 140 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 SERPINE3A8MV23 424 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 FOXH1O75593 365 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 HLA-DQB1P01920 261 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 MT-ND4P03905 459 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 CSN2P05814 226 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 FCER2P06734 321 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 ERP29P30040 261 aaKnown RBP6.37□□□□□ -1.39
SMG1-214ENST00000568038 GLP1RP43220 463 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 KCNJ3P48549 501 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 P2RX3P56373 397 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 GNG2P59768 71 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 RPL31P62899 125 aaKnown RBP6.37□□□□□ -1.39
SMG1-214ENST00000568038 IL18Q14116 193 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 ARL6IP1Q15041 203 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 PNLIPRP3Q17RR3 467 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 HACD4Q5VWC8 232 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 SLC35E4Q6ICL7 350 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 FAM131AQ6UXB0 335 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 ZNF497Q6ZNH5 498 aa6.37□□□□□ -1.39
SMG1-214ENST00000568038 TRAPPC6BQ86SZ2 158 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms