RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NSUN5P1Q3KNT7 163 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 ATAD3CQ5T2N8 411 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 GLIPR1L1Q6UWM5 242 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 C16orf82Q7Z2V1 217 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 LINC00596Q86U02 117 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 JAGN1Q8N5M9 183 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 TMEM104Q8NE00 496 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 UBALD1Q8TB05 177 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 CCDC107Q8WV48 283 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
FANCA-220ENST00000566409 RCC2Q9P258 522 aaKnown RBP11.68□□□□□ -0.54
FANCA-220ENST00000566409 TMEM30CPA0ZSE6 113 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 MYL12BO14950 172 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 GZMHP20718 246 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 VHLP40337 213 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 GNG10P50151 68 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 LOXL3P58215 753 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 ABCA11PQ4W5N1 156 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 TCTEX1D4Q5JR98 221 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 C6orf141Q5SZD1 244 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 UNQ9370/PRO34162Q6UXP9 181 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 CDH26Q8IXH8 852 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 OR10A7Q8NGE5 316 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 BANF2Q9H503 90 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 ERGIC3Q9Y282 383 aa11.67□□□□□ -0.54
FANCA-220ENST00000566409 LSM2Q9Y333 95 aaKnown RBP11.67□□□□□ -0.54
FANCA-220ENST00000566409 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 G3V4G9 280 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 LPLP06858 475 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 AQP4P55087 323 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 CD83Q01151 205 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 GPR176Q14439 515 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
FANCA-220ENST00000566409 FAM27D1Q5T7N8 215 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 CCDC144NLQ6NUI1 221 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 SLC16A12Q6ZSM3 486 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 GAPTQ8N292 157 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 OR5AU1Q8NGC0 362 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 OR56B4Q8NH76 319 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 CAPSLQ8WWF8 208 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 TOMM40LQ969M1 308 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 RPEQ96AT9 228 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 MRPS24Q96EL2 167 aaKnown RBP11.66□□□□□ -0.54
FANCA-220ENST00000566409 PCDHB16Q9NRJ7 776 aa11.66□□□□□ -0.54
FANCA-220ENST00000566409 H3BUI4 141 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 ORC5O43913 435 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 PEX14O75381 377 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 SNRNP70P08621 437 aaKnown RBP11.65□□□□□ -0.54
FANCA-220ENST00000566409 MNDAP41218 407 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 MADCAM1Q13477 382 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 IRF3Q14653 427 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 AWAT2Q6E213 333 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 RAB12Q6IQ22 244 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 SELENOIQ9C0D9 397 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 VCXQ9H320 206 aa11.65□□□□□ -0.54
FANCA-220ENST00000566409 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
FANCA-220ENST00000566409 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 MGMTP16455 207 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 SLC35A2P78381 396 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 EMX1Q04741 257 aaPredicted RBP11.64□□□□□ -0.55
FANCA-220ENST00000566409 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 SYT6Q5T7P8 510 aaPredicted RBP11.64□□□□□ -0.55
FANCA-220ENST00000566409 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 LRRTM1Q86UE6 522 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 OR52M1Q8NGK5 317 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 NEK7Q8TDX7 302 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 Q96M66 194 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 UQCC2Q9BRT2 126 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 MND1Q9BWT6 205 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 PEX16Q9Y5Y5 336 aa11.64□□□□□ -0.55
FANCA-220ENST00000566409 MCRIP1C9JLW8 97 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 H0YHG0 523 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 AIPO00170 330 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 SDCBPO00560 298 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 SLC31A2O15432 143 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 CRTAPO75718 401 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 SC5DO75845 299 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
FANCA-220ENST00000566409 REG1BP48304 166 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 RAB7AP51149 207 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 ZNF134P52741 427 aa11.63□□□□□ -0.55
FANCA-220ENST00000566409 GABPB1Q06547 395 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms