RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DUX4L5P0CJ88 424 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DUX4L6P0CJ89 424 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DUX4L7P0CJ90 424 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR8G3PP0DMU2 310 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CALCBP10092 127 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CLUP10909 449 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC2A1P11166 492 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 COX4I1P13073 169 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 IDO1P14902 403 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NQO1P15559 274 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 MUC1P15941 1255 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 H2AFXP16104 143 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 CBR1P16152 277 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NPR2P20594 1047 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RPS4Y1P22090 263 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 USF1P22415 310 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 PYCR1P32322 319 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CD80P33681 288 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 KDELR2P33947 212 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 POLR2IP36954 125 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 GPR4P46093 362 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CSNK1A1P48729 337 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RAB13P51153 203 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 EFNA4P52798 201 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 UGT2B15P54855 530 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 PSMD4P55036 377 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 RGS8P57771 180 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 FXYD6P3P58550 94 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 COPZ1P61923 177 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SELENOWP63302 87 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 LCN2P80188 198 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 PSG4Q00888 419 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 GALK2Q01415 458 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 LIPEQ05469 1076 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RPL18Q07020 188 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 SCN1BQ07699 218 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SELENBP1Q13228 472 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SNTB2Q13425 540 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 CCDC92Q53HC0 331 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 CYBRD1Q53TN4 286 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 PABPC1L2AQ5JQF8 200 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CLEC12AQ5QGZ9 265 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TIMM23BQ5SRD1 257 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DNLZQ5SXM8 178 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 PRAMEF7Q5VXH5 474 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMEM236Q5W0B7 351 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 GLYATQ6IB77 296 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR2T2Q6IF00 324 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR2A2Q6IF42 318 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 C11orf71Q6IPW1 123 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 REEP3Q6NUK4 255 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ULK3Q6PHR2 472 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DUX4L9Q6RFH8 374 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 SMARCD3Q6STE5 483 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 C6orf89Q6UWU4 347 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 LYPD2Q6UXB3 125 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 Q6ZR03 302 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC35D2Q76EJ3 337 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 GRINAQ7Z429 371 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 MTERF4Q7Z6M4 381 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 OAFQ86UD1 273 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 MISPQ8IVT2 679 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NRMQ8IXM6 262 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RDH10Q8IZV5 341 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMEM123Q8N131 208 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR6V1Q8N148 313 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 PNKDQ8N490 385 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC22A24Q8N4F4 322 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SIGLECL1Q8N7X8 197 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 EIF1ADQ8N9N8 165 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 CYB561A3Q8NBI2 242 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 BHLHE23Q8NDY6 225 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 FAM71CQ8NEG0 241 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR2Z1Q8NG97 314 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR4K5Q8NGD3 323 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR13C2Q8NGS9 318 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR6N1Q8NGY5 312 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR4K13Q8NH42 304 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CLDND2Q8NHS1 167 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 MFSD8Q8NHS3 518 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ZNF420Q8TAQ5 688 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC25A40Q8TBP6 338 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SFXN5Q8TD22 340 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 C17orf50Q8WW18 174 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMEM234Q8WY98 164 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ST8SIA1Q92185 356 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 HIST1H2ACQ93077 130 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC38A4Q969I6 547 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMEM54Q969K7 222 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CPNE4Q96A23 557 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 TESCQ96BS2 214 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 LRRC58Q96CX6 371 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DDIT4LQ96D03 193 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RCN3Q96D15 328 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC41A3Q96GZ6 507 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ITCHQ96J02 903 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ATP6V1G3Q96LB4 118 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SAMD8Q96LT4 415 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms