RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR4A4PQ8NGN8 299 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 ENKURQ8TC29 256 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 CCDC107Q8WV48 283 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 LURAP1Q96LR2 239 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 NARFLQ9H6Q4 476 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 MBNL3Q9NUK0 354 aaKnown RBP10.65□□□□□ -0.7
CLK3-214ENST00000564096 MCUBQ9NWR8 336 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 OPN4Q9UHM6 478 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
CLK3-214ENST00000564096 F5H0A9 414 aaPredicted RBP10.64□□□□□ -0.71
CLK3-214ENST00000564096 CD3DP04234 171 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 CDK10Q15131 360 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 HMGN3Q15651 99 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 CLEC12BQ2HXU8 276 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 CD276Q5ZPR3 534 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 FAM185AQ8N0U4 392 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 ARRDC1Q8N5I2 433 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 TPRX1Q8N7U7 411 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 OR4C16Q8NGL9 310 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 MRGPRDQ8TDS7 321 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 PRRT1Q99946 306 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 SSBP3Q9BWW4 388 aaPredicted RBP10.64□□□□□ -0.71
CLK3-214ENST00000564096 EHFQ9NZC4 300 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 TBC1D24Q9ULP9 559 aa10.64□□□□□ -0.71
CLK3-214ENST00000564096 UBE2J1Q9Y385 318 aaPredicted RBP10.64□□□□□ -0.71
CLK3-214ENST00000564096 ZNF729A6NN14 1252 aaPredicted RBP10.63□□□□□ -0.71
CLK3-214ENST00000564096 IGHV2-5P01817 119 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 AMY2AP04746 511 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 WNT2P09544 360 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 GZMHP20718 246 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 IL2RGP31785 369 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 TSPAN5P62079 268 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 IFITM3Q01628 133 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 Q5PR19 223 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
CLK3-214ENST00000564096 ZNF782Q6ZMW2 699 aaPredicted RBP10.63□□□□□ -0.71
CLK3-214ENST00000564096 PRR18Q8N4B5 295 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 MINDY2Q8NBR6 621 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 OR13A1Q8NGR1 328 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 GALMQ96C23 342 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 GINS4Q9BRT9 223 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 CABLES2Q9BTV7 478 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 C11orf54Q9H0W9 315 aaPredicted RBP10.63□□□□□ -0.71
CLK3-214ENST00000564096 TAF9BQ9HBM6 251 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 HRASLSQ9HDD0 168 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 TAS2R3Q9NYW6 316 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
CLK3-214ENST00000564096 FAM240BA0A1B0GVZ2 78 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 VWC2LB2RUY7 222 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 C12orf77C9JDV5 145 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 M0QYG6 137 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 HSPA12AO43301 675 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 PMP2P02689 132 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 OR5H8P0DN80 308 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 RCC1P18754 421 aaPredicted RBP10.62□□□□□ -0.71
CLK3-214ENST00000564096 ECI1P42126 302 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 OR10J5Q8NHC4 309 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 IL1F10Q8WWZ1 152 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 ZNF714Q96N38 554 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 DCTN5Q9BTE1 182 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
CLK3-214ENST00000564096 DPAGT1Q9H3H5 408 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 C19orf12Q9NSK7 152 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 SLC2A8Q9NY64 477 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 CALYQ9NYX4 217 aa10.62□□□□□ -0.71
CLK3-214ENST00000564096 IGHV4-30-2A0A087WSY4 118 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 A0A1W2PPE2 198 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 A0A1W2PR64 198 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 A8MXK9 166 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 BET1O15155 118 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
CLK3-214ENST00000564096 FOXH1O75593 365 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 HBZP02008 142 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 GSTT2P0CG29 244 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 SSTR5P35346 364 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 HERV-K104P61576 105 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 SEC61A1P61619 476 aaKnown RBP10.61□□□□□ -0.71
CLK3-214ENST00000564096 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
CLK3-214ENST00000564096 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 SCGB2B2Q4G0G5 96 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 FAAP20Q6NZ36 180 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 ZNF841Q6ZN19 808 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 Q6ZPA2 131 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 BTN2A1Q7KYR7 527 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 OVCH2Q7RTZ1 564 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 CORO2AQ92828 525 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 ARL11Q969Q4 196 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 KIRREL1Q96J84 757 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 ZNF69Q9UC07 566 aa10.61□□□□□ -0.71
CLK3-214ENST00000564096 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms