RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CEACAM6P40199 344 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 H1FOOQ8IZA3 346 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 CNEP1R1Q8N9A8 125 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 OR4C5Q8NGB2 326 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 ZNF385AQ96PM9 386 aaKnown RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 POU2F2P09086 479 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 PAQR4Q8N4S7 273 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 TMEM9BQ9NQ34 198 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 BOKQ9UMX3 212 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 FAM166BA8MTA8 275 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 RPLP1P05386 114 aaKnown RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 CDC34P49427 236 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 LSM6P62312 80 aaKnown RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 CD5P06127 495 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 SELENOVP59797 346 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 PRDX4Q13162 271 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 Q6ZN92 141 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 LINC00696Q6ZRV3 163 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 AGBL5Q8NDL9 886 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 OR10V1Q8NGI7 309 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 APH1AQ96BI3 265 aa10.98□□□□□ -0.65
COMMD4-209ENST00000564068 MSI2Q96DH6 328 aaKnown RBP10.98□□□□□ -0.65
COMMD4-209ENST00000564068 TSC2P49815 1807 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 A0A1W2PQF6 199 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 CER1O95813 267 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 NDUFB7P17568 137 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 PCP4P48539 62 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 PYY3Q5JQD4 70 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 UBALD2Q8IYN6 164 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 TUBA4BQ9H853 241 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 C9JQL5 133 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 FAM157CP0CG43 387 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 PSG2P11465 335 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 IGFBP3P17936 291 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 OIT3Q8WWZ8 545 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 CIB3Q96Q77 187 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 SPINT2O43291 252 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 OR10J1P30954 320 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 GALNSP34059 522 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 CNN1P51911 297 aaKnown RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 TCL1AP56279 114 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 CCL20P78556 96 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 FOXO1Q12778 655 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 WIPI1Q5MNZ9 446 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 ANKRD37Q7Z713 158 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 RTN4RL2Q86UN3 420 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-209ENST00000564068 TMEM204Q9BSN7 226 aa10.97□□□□□ -0.65
COMMD4-209ENST00000564068 IGHV1OR21-1A0A087WYE8 117 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 SH2D1BO14796 132 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 TSPAN2O60636 221 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 TMEM187Q14656 261 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 ZNF124Q15973 351 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-209ENST00000564068 RABEPKQ7Z6M1 372 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 GABRG3Q99928 467 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 DUSP13Q9UII6 198 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 SCTP09683 121 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 GLB1P16278 677 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 FABP6P51161 128 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 TAS2R60P59551 318 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 TMEM222Q9H0R3 208 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 RPRMQ9NS64 109 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
COMMD4-209ENST00000564068 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 ST8SIA5O15466 376 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 GYPAP02724 150 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 AGAP20933 346 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 CYB561P49447 251 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 DUSP3P51452 185 aaPredicted RBP10.96□□□□□ -0.66
COMMD4-209ENST00000564068 COL19A1Q14993 1142 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 HLA-BQ31612 363 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 OR5B3Q8NH48 314 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 TPPP3Q9BW30 176 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.96□□□□□ -0.66
COMMD4-209ENST00000564068 WNT16Q9UBV4 365 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 PTPRDP23468 1912 aa10.96□□□□□ -0.66
COMMD4-209ENST00000564068 DEFB108AA8MXU0 73 aa10.95□□□□□ -0.66
COMMD4-209ENST00000564068 SRP19P09132 144 aaKnown RBP10.95□□□□□ -0.66
COMMD4-209ENST00000564068 MEF2BQ02080 365 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms