RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-218	ENST00000563686	AQP7	O14520	342 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	COX5B	P10606	129 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	RND3	P61587	244 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SRSF3	P84103	164 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	PLAUR	Q03405	335 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	C4orf17	Q53FE4	359 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF818P	Q6ZRF7	136 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	C1QL2	Q7Z5L3	287 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	MYPOP	Q86VE0	399 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	OR1K1	Q8NGR3	316 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	WNT2B	Q93097	391 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	FAM210B	Q96KR6	192 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	PNRC2	Q9NPJ4	139 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	DEFB108A	A8MXU0	73 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686		J3QT63	122 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ARG1	P05089	322 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SCT	P09683	121 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	LYL1	P12980	280 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SPINK9	Q5DT21	86 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	C17orf82	Q86X59	251 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	EDARADD	Q8WWZ3	215 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	OR5P3	Q8WZ94	311 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	CDX2	Q99626	313 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	FAM117A	Q9C073	453 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	IGHV3-64D	A0A0J9YX35	117 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	XKRY2	A2RUG3	117 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	HSPB1	P04792	205 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	HLA-G	P17693	338 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	VDAC1	P21796	283 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	G6PC	P35575	357 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	LTBR	P36941	435 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ID4	P47928	161 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	TAS2R45	P59539	299 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	UBE2G2	P60604	165 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF90	Q03938	601 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	C16orf82	Q7Z2V1	217 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	BAGE3	Q86Y29	109 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	BAGE2	Q86Y30	109 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	OR8G5	Q8NG78	346 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	OR2Z1	Q8NG97	314 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SPSB2	Q99619	263 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	LINC00470	Q9BZP3	86 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	RBKS	Q9H477	322 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	CLDN34	H7C241	214 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ENSA	O43768	121 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	RAMP1	O60894	148 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	PTBP3	O95758	552 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OPN1MW	P04001	364 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OPN1MW2	P0DN77	364 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OPN1MW3	P0DN78	364 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	DAO	P14920	347 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	RPS2	P15880	293 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SRP14	P37108	136 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SUB1	P53999	127 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	DEFB109B	Q30KR1	87 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686		Q3ZCU0	254 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ISOC2	Q96AB3	205 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	MARS2	Q96GW9	593 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC35E1	Q96K37	410 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	hCG_38984	A0A1B0GV85	526 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SEC14L6	B5MCN3	397 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	EIF3G	O75821	320 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	AGFG2	O95081	481 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SP1	P08047	785 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	MPL	P40238	635 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZXDA	P98168	799 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	COL10A1	Q03692	680 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	NCMAP	Q5T1S8	102 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC23A3	Q6PIS1	610 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	MRGPRD	Q8TDS7	321 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	LRRC29	Q8WV35	223 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	PKIB	Q9C010	78 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	DUSP13	Q9UII6	198 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	PSG11	Q9UQ72	335 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	PDE6D	O43924	150 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZIC3	O60481	467 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	CDC34	P49427	236 aa	Predicted RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	TPPP2	P59282	170 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	BPIFB3	P59826	476 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	KHDC3L	Q587J8	217 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	DEFB123	Q8N688	67 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SCCPDH	Q8NBX0	429 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10S1	Q8NGN2	331 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	R3HDM4	Q96D70	268 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	POM121	Q96HA1	1249 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	TP53RK	Q96S44	253 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	CYTL1	Q9NRR1	136 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	RPH3AL	Q9UNE2	315 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ATP23	Q9Y6H3	246 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	IGHV3-43	A0A0B4J1X8	118 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	IGHV3-43D	P0DP04	118 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	CD82	P27701	267 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OR3A1	P47881	315 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ABLIM2	Q6H8Q1	611 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	FAM89B	Q8N5H3	189 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	H1FX	Q92522	213 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms