RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 WBP2NLQ6ICG8 309 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 LCN10Q6JVE6 187 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 COX15Q7KZN9 410 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 TMEM256Q8N2U0 113 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF709Q8N972 641 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 OR52N5Q8NH56 324 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 VN1R17PQ8TDU5 208 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 FAM3CQ92520 227 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 FOXN4Q96NZ1 517 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 SIGLEC12Q96PQ1 595 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 TAAR6Q96RI8 345 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ULBP3Q9BZM4 244 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 AICDAQ9GZX7 198 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 OR10A2Q9H208 303 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 KCNK15Q9H427 330 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 LYRM4Q9HD34 91 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 PLSCR4Q9NRQ2 329 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 PEF1Q9UBV8 284 aaKnown RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 SLC22A13Q9Y226 551 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 MRPS28Q9Y2Q9 187 aaKnown RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 LY96Q9Y6Y9 160 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 COL4A2P08572 1712 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF318Q5VUA4 2279 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 TRAV9-2A0A087WT02 112 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 A0A087WV48 116 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 LOC107986453A0A1B0GWG9 222 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 EPOPA6NHQ4 379 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 H0Y8G0 127 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ZNF737O75373 536 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ONECUT2O95948 504 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 MT-ATP6P00846 226 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 HLA-DRB1P01911 266 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 CTSBP07858 339 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 OR10J4P0C629 311 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 C1QTNF9P0C862 333 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ZNF728P0DKX0 622 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SMIM10L1P0DMW3 83 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 CPMP14384 443 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 CCNOP22674 350 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 GCH1P30793 250 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 LHX2P50458 406 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 TSTA3Q13630 321 aaPredicted RBP6.26□□□□□ -1.41
CDH1-203ENST00000561751 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH1-203ENST00000561751 HIST3H3Q16695 136 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 FAM78AQ5JUQ0 283 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 PRAMEF20Q5VT98 475 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SAMD13Q5VXD3 122 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 KIAA0895LQ68EN5 471 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 GTF2H5Q6ZYL4 71 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ABHD12BQ7Z5M8 362 aaPredicted RBP6.26□□□□□ -1.41
CDH1-203ENST00000561751 CALHM1Q8IU99 346 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 OR5C1Q8NGR4 320 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ZPLD1Q8TCW7 415 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SCGB1C1Q8TD33 95 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SSC4DQ8WTU2 575 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 DYRK2Q92630 601 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SCAMP4Q969E2 229 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 SMIM10Q96HG1 83 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 C1orf147Q96MC9 270 aaPredicted RBP6.26□□□□□ -1.41
CDH1-203ENST00000561751 TSPAN32Q96QS1 320 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 RAB40CQ96S21 281 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 TMEM59Q9BXS4 323 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 MMP25Q9NPA2 562 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 NECAP2Q9NVZ3 263 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 LSM7Q9UK45 103 aaKnown RBP6.26□□□□□ -1.41
CDH1-203ENST00000561751 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CDH1-203ENST00000561751 DENND4CQ5VZ89 1909 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 IGLV1-36A0A0B4J1U3 117 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 NPIPA5A0A0B4J1W7 369 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 A0A0U1RQK1 487 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 CENPVL1A0A0U1RR11 272 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 IGSF23A1L1A6 192 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 LINC01553A4QN01 128 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 TMEM189A5PLL7 270 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 DPRXA6NFQ7 191 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 FAM24AA6NFZ4 105 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 CEBPZOSA8MTT3 80 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 NPIPA7E9PJI5 369 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 PDE6DO43924 150 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 S1PR2O95136 353 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 GOSR1O95249 250 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 SCGB1D2O95969 90 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 CGAP01215 116 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 TNFP01375 233 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 GYPAP02724 150 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 BGLAPP02818 100 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 SERPINA7P05543 415 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 CD55P08174 381 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 NPIPA8P0DM63 369 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 GRPRP30550 384 aa6.25□□□□□ -1.41
CDH1-203ENST00000561751 PIGPP57054 158 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms