RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MIXL1Q9H2W2 232 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM138Q9NPI0 162 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 B3GNT2Q9NY97 397 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 TAS2R13Q9NYV9 303 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF225Q9UK10 706 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 VPREB3Q9UKI3 123 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 SAMD4AQ9UPU9 718 aaKnown RBP3.27□□□□□ -1.89
LRRC28-222ENST00000561431 GOLT1BQ9Y3E0 138 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 OARD1Q9Y530 152 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 ASB4Q9Y574 426 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 MYO18BQ8IUG5 2567 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 BSNQ9UPA5 3926 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 PCM1Q15154 2024 aa3.27□□□□□ -1.89
LRRC28-222ENST00000561431 SNRNP200O75643 2136 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 A0A0J9YWU9 116 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 A0A1W2PRG6 482 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 LRIT2A6NDA9 550 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 MPTX1A8MV57 137 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 C4orf51C9J302 202 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 PPP5D1E7EU14 171 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 H7C2Y5 167 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 J3QKU1 62 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 K7EQD1 137 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CDC7O00311 574 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TXNDC9O14530 226 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 HSD17B6O14756 317 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 RGS16O15492 202 aaPredicted RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TNFSF12O43508 249 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ENTPD6O75354 484 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ZFAND5O76080 213 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 IFNGP01579 166 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 HBE1P02100 147 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 STATHP02808 62 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 THY1P04216 161 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TYMSP04818 313 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 AKR1C4P17516 323 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 RPL4P36578 427 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 OR1D4P47884 311 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TFPI2P48307 235 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SULT1A1P50225 295 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SULT1A2P50226 295 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 FBXW4P57775 412 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 GNG2P59768 71 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 BTN3A2P78410 334 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CD164Q04900 197 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CD300CQ08708 224 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SKP2Q13309 424 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 UBE2V2Q15819 145 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 DUSP7Q16829 419 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CYB5R2Q6BCY4 276 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 FAM71E1Q6IPT2 247 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ATRAIDQ6UW56 229 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF730Q6ZMV8 503 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF497Q6ZNH5 498 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 Q6ZRG5 221 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SHISA6Q6ZSJ9 500 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 PRSS41Q7RTY9 318 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 RAB43Q86YS6 212 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CA13Q8N1Q1 262 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ACOT4Q8N9L9 421 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ZSCAN4Q8NAM6 433 aaPredicted RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 FDCSPQ8NFU4 85 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 OR4F15Q8NGB8 312 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 OR10G3Q8NGC4 313 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 OR8J3Q8NGG0 315 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TOMM40LQ969M1 308 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 EXOSC8Q96B26 276 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 MOCOSQ96EN8 888 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 MRPL48Q96GC5 212 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF488Q96MN9 340 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 OVOL2Q9BRP0 275 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 AGMATQ9BSE5 352 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM208Q9BTX3 173 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 FAIM2Q9BWQ8 316 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CCDC90BQ9GZT6 254 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 AICDAQ9GZX7 198 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 NXF2Q9GZY0 626 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 ARV1Q9H2C2 271 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 GLIPR2Q9H4G4 154 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 NT5DC2Q9H857 520 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 TPT1P8Q9HAU6 139 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 POPDC3Q9HBV1 291 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SLC25A19Q9HC21 320 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 IL1RAPQ9NPH3 570 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 AGPAT4Q9NRZ5 378 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SPANXA1Q9NS26 97 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SEC14L4Q9UDX3 406 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 MLXQ9UH92 298 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 LGALS13Q9UHV8 139 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 SLC7A11Q9UPY5 501 aa3.26□□□□□ -1.89
LRRC28-222ENST00000561431 EXOSC1Q9Y3B2 195 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 UTP20O75691 2785 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 FASNP49327 2511 aaKnown RBP3.26□□□□□ -1.89
LRRC28-222ENST00000561431 CENPVL3A0A0U1RRI6 287 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 PRORSD1PA6NEY8 169 aa3.25□□□□□ -1.89
LRRC28-222ENST00000561431 CLDN24A6NM45 220 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms