RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PPIL3Q9H2H8 161 aaKnown RBP12.84□□□□□ -0.35
LMX1B-204ENST00000561065 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 DPM3Q9P2X0 92 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
LMX1B-204ENST00000561065 HILPDAQ9Y5L2 63 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 TMEM30CPA0ZSE6 113 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 HSPB6O14558 160 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 GEMIN2O14893 280 aaKnown RBP12.83□□□□□ -0.36
LMX1B-204ENST00000561065 DYNLT3P51808 116 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 WIPF2Q8TF74 440 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-204ENST00000561065 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 KIF25Q9UIL4 384 aa12.83□□□□□ -0.36
LMX1B-204ENST00000561065 AMMECR1Q9Y4X0 333 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-204ENST00000561065 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-204ENST00000561065 BPNT1O95861 308 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 VSIG10L2P0DP72 767 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 CPEP16870 476 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 FUT3P21217 361 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 GLP1RP43220 463 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 GABARAPL2P60520 117 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 TMEM95Q3KNT9 176 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 TRAT1Q6PIZ9 186 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 ZNF367Q7RTV3 350 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 KCNG3Q8TAE7 436 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 AKR1E2Q96JD6 320 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 SELENOIQ9C0D9 397 aa12.82□□□□□ -0.36
LMX1B-204ENST00000561065 PLXNB1O43157 2135 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 F2RL2O00254 374 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 PIN1P1O15428 100 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 DENRO43583 198 aaKnown RBP12.81□□□□□ -0.36
LMX1B-204ENST00000561065 IGLV1-47P01700 117 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 CSF1P09603 554 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 UCHL1P09936 223 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 MGMTP16455 207 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 NFYBP25208 207 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 CD34P28906 385 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 MNDAP41218 407 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 TBCEQ15813 527 aaPredicted RBP12.81□□□□□ -0.36
LMX1B-204ENST00000561065 Q6ZTK2 550 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 TMEM203Q969S6 136 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 NEDD4LQ96PU5 975 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 LINC00574Q9H8X3 128 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 IDI2-AS1Q9NZ38 188 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 PEX16Q9Y5Y5 336 aa12.81□□□□□ -0.36
LMX1B-204ENST00000561065 A0A087X0M5 115 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 A0A1B0GX30 115 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 SPINT2O43291 252 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 IL1AP01583 271 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 CD24P25063 80 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 HTR2CP28335 458 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 RSBN1Q5VWQ0 802 aaPredicted RBP12.8□□□□□ -0.36
LMX1B-204ENST00000561065 RAB12Q6IQ22 244 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 LYG1Q8N1E2 194 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 PLGRKTQ9HBL7 147 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 CALYQ9NYX4 217 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 LRRC42Q9Y546 428 aa12.8□□□□□ -0.36
LMX1B-204ENST00000561065 MAGEA13PA6NCF6 341 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 PDCD5O14737 125 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 ORC5O43913 435 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 BLCAPP62952 87 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 C1orf100Q5SVJ3 147 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 C6orf183Q5T699 404 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 OR13A1Q8NGR1 328 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 FCGR1BQ92637 280 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 URM1Q9BTM9 101 aaKnown RBP12.79□□□□□ -0.36
LMX1B-204ENST00000561065 WNT10AQ9GZT5 417 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 ETAA1Q9NY74 926 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
LMX1B-204ENST00000561065 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 AIPO00170 330 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 SC5DO75845 299 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 LPLP06858 475 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 CGB3P0DN86 165 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 CGB7P0DN87 165 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 CD28P10747 220 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 GALP22466 123 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 HLA-DRB5Q30154 266 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 ZNF497Q6ZNH5 498 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 C16orf82Q7Z2V1 217 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 SGCDQ92629 289 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 ARL11Q969Q4 196 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 KIRREL1Q96J84 757 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
LMX1B-204ENST00000561065 BANF2Q9H503 90 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms