RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 A0A1W2PP11 408 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 NUDT19A8MXV4 375 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 C15orf65H3BRN8 121 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 HSD17B6O14756 317 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 GEMIN2O14893 280 aaKnown RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 FGF16O43320 207 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 MPZL2O60487 215 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 OR7C1O76099 320 aaPredicted RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 KCNJ3P48549 501 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 ETV1P50549 477 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 RBM11P57052 281 aaKnown RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 MRPL28Q13084 256 aaKnown RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 OR2G6Q5TZ20 316 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 ZFP1Q6P2D0 407 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 SLC35E3Q7Z769 313 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 OR51D1Q8NGF3 324 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 OR13C5Q8NGS8 318 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 GPR148Q8TDV2 347 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 CCDC107Q8WV48 283 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 CPNE2Q96FN4 548 aaPredicted RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 Q96MT0 163 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 FAM118AQ9NWS6 357 aa9.17□□□□□ -0.94
USP3-214ENST00000559718 RPL36Q9Y3U8 105 aaKnown RBP9.17□□□□□ -0.94
USP3-214ENST00000559718 KMT2CQ8NEZ4 4911 aaKnown RBP9.16□□□□□ -0.94
USP3-214ENST00000559718 IGHV3-43A0A0B4J1X8 118 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 IGHV1-3A0A0C4DH29 117 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 MAGEA13PA6NCF6 341 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 CCRL2O00421 344 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 WBP4O75554 376 aaKnown RBP9.16□□□□□ -0.94
USP3-214ENST00000559718 IGHG2P01859 326 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 IGHV3-43DP0DP04 118 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 SERPINA2P20848 420 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 ZNF816Q0VGE8 651 aaPredicted RBP9.16□□□□□ -0.94
USP3-214ENST00000559718 EBI3Q14213 229 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 DDI2Q5TDH0 399 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 STPG2Q8N412 459 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 OR10A7Q8NGE5 316 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 TMEM106AQ96A25 262 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
USP3-214ENST00000559718 P2RX4Q99571 388 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 C9orf16Q9BUW7 83 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 METTL9Q9H1A3 318 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 TMEM138Q9NPI0 162 aa9.16□□□□□ -0.94
USP3-214ENST00000559718 TMEM30CPA0ZSE6 113 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 NCBP2LA6PVI3 153 aaKnown RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 ZNF736B4DX44 427 aaPredicted RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 SDCBPO00560 298 aaPredicted RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 SLC31A2O15432 143 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 GAPDHP04406 335 aaKnown RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 CD2P06729 351 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 BDKRB2P30411 391 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 ZNF93P35789 620 aaPredicted RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 MYCNOSP40205 109 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 SLC35B1P78383 322 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 SLC22A6Q4U2R8 563 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 KLHL22Q53GT1 634 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 NHLRC3Q5JS37 347 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 RPL22L1Q6P5R6 122 aaKnown RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 SLC16A12Q6ZSM3 486 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 Q8N6K4 173 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 Q8N9W7 124 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 ARL11Q969Q4 196 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 RAX2Q96IS3 184 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 CYYR1Q96J86 154 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 IFT22Q9H7X7 185 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 FGF20Q9NP95 211 aaPredicted RBP9.15□□□□□ -0.94
USP3-214ENST00000559718 ZFP57Q9NU63 452 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 IL36GQ9NZH8 169 aa9.15□□□□□ -0.94
USP3-214ENST00000559718 LALBAP00709 142 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 MT-ND4P03905 459 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
USP3-214ENST00000559718 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
USP3-214ENST00000559718 GZMHP20718 246 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 GPR12P47775 334 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 RAB25P57735 213 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 PPP3R1P63098 170 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 CD69Q07108 199 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 ZNF695Q8IW36 515 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 FOXRED2Q8IWF2 684 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 IZUMO1Q8IYV9 350 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 LINC00311Q8N616 119 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 TMEM104Q8NE00 496 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 RTN4IP1Q8WWV3 396 aaPredicted RBP9.14□□□□□ -0.95
USP3-214ENST00000559718 DPF1Q92782 380 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 ZNF184Q99676 751 aaPredicted RBP9.14□□□□□ -0.95
USP3-214ENST00000559718 ABCG5Q9H222 651 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 S100A14Q9HCY8 104 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 PLSCR3Q9NRY6 295 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 GFOD1Q9NXC2 390 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 CLEC2DQ9UHP7 191 aa9.14□□□□□ -0.95
USP3-214ENST00000559718 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms