RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRAMEF6Q5VXH4 476 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 CST9LP1Q5W188 147 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 Q6ZS92 163 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 NRIP2Q9BQI9 281 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 FBXL17Q9UF56 701 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 RNF115Q9Y4L5 304 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 TRAV38-1A0A0B4J264 116 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 SERPINE3A8MV23 424 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 FAM219AQ8IW50 185 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF485Q8NCK3 441 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 OR5A2Q8NGI9 324 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 SLC25A38Q96DW6 304 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 SPTBN4Q9H254 2564 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 EIF3GO75821 320 aaKnown RBP eCLIP9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 OR2A4O95047 310 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 SFT2D2O95562 160 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 MBP02144 154 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 CALCRP30988 508 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 PIGPP57054 158 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 MDS2Q8NDY4 140 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 TMEM104Q8NE00 496 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 RTN4IP1Q8WWV3 396 aaPredicted RBP9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 GALMQ96C23 342 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 TVP23CQ96ET8 276 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 S1PR3Q99500 378 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ALX4Q9H161 411 aaPredicted RBP9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF355PQ9NSJ1 428 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 CEP295Q9C0D2 2601 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 A0A087X0M5 115 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 TRBV23-1A0A0A0MS06 115 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 A0A1B0GX30 115 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 MPTX1A8MV57 137 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 NPIPB7O75200 414 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 OR4A8P0C604 315 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 PAX6P26367 422 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 KIR3DL2P43630 455 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 GPR12P47775 334 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 B2MP61769 119 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 SP6Q3SY56 376 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF429Q86V71 674 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 LINC00470Q9BZP3 86 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 WNT5BQ9H1J7 359 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 RNF7Q9UBF6 113 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 CBY1Q9Y3M2 126 aa9.21□□□□□ -0.93
CARMIL3-202ENST00000559694 GATCO43716 136 aaKnown RBP9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 ASCL1P50553 236 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 TAS2R30P59541 319 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 HTD2P86397 168 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 ROM1Q03395 351 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 TIMM23BQ5SRD1 257 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 PLEKHF2Q9H8W4 249 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 ONECUT1Q9UBC0 465 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 COL4A3Q01955 1670 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 PDCD6O75340 191 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 FGF7P21781 194 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM33P57088 247 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 TEX30Q5JUR7 227 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 SLC25A42Q86VD7 318 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 OR8U1Q8NH10 309 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 RGP1Q92546 391 aaPredicted RBP9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM45BQ96B21 275 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 MAGT1Q9H0U3 335 aa9.21□□□□□ -0.94
CARMIL3-202ENST00000559694 J3QT63 122 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 ZG16O60844 167 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 IGHV3-13P01766 116 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 IGHV3-7P01780 117 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 APOA2P02652 100 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 MUC1P15941 1255 aaPredicted RBP9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 SULT1A1P50225 295 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 HBG1P69891 147 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 HBG2P69892 147 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 C10orf128Q5T292 105 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 ZNF383Q8NA42 475 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 GPX8Q8TED1 209 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 MEGF10Q96KG7 1140 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 CHST5Q9GZS9 411 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 FREM3P0C091 2139 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 WNK2Q9Y3S1 2297 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 TGOLN2O43493 480 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 SLC25A4P12235 298 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 ADRA2CP18825 462 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 FPR2P25090 351 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 PTGDSP41222 190 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 Q3ZCU0 254 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 GGNBP1Q5YKI7 109 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 C17orf78Q8N4C9 275 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 C10orf35Q96D05 121 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 SOSTQ9BQB4 213 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 LPAR2Q9HBW0 351 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 FOXD3Q9UJU5 478 aaPredicted RBP9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 WSB1Q9Y6I7 421 aa9.2□□□□□ -0.94
CARMIL3-202ENST00000559694 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms