RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PAN3Q58A45 887 aaKnown RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 KRBOX4Q5JUW0 171 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 PRAMEF5Q5TYX0 476 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 GDPGP1Q6ZNW5 385 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 Q6ZSV7 163 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TRAPPC6BQ86SZ2 158 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR13D1Q8NGV5 346 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR4F5Q8NH21 305 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR5R1Q8NH85 324 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 PLPPR1Q8TBJ4 325 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 PIFOQ8TCI5 191 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CORO2AQ92828 525 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 MYDGFQ969H8 173 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 SSX3Q99909 188 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 METTL9Q9H1A3 318 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TMEM133Q9H2Q1 129 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 VCX3BQ9H321 246 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 DUSP21Q9H596 190 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 SCN3BQ9NY72 215 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CKLFQ9UBR5 152 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 ING4Q9UNL4 249 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 FOXJ3Q9UPW0 622 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 UBE2J1Q9Y385 318 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TBL2Q9Y4P3 447 aaKnown RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 NOTCH1P46531 2555 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 A0A1B0GUS0 222 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CLPSL1A2RUU4 121 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 FUOMA2VDF0 154 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 FAM172BPA6NC97 362 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 VGLL3A8MV65 326 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 B5MCH6 92 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 GEMIN2O14893 280 aaKnown RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 SC5DO75845 299 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 ATP6V1G2O95670 118 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 MAS1P04201 325 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CGB3P0DN86 165 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CGB7P0DN87 165 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 SERPINA2P20848 420 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CRHBPP24387 322 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 CDK2P24941 298 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 PAX5Q02548 391 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 LY6EQ16553 131 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 AANATQ16613 207 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 C17orf58Q2M2W7 97 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 UTF1Q5T230 341 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 FAM27D1Q5T7N8 215 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 RSBN1Q5VWQ0 802 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OLFML2AQ68BL7 652 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 DHRS7BQ6IAN0 325 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 UNQ9370/PRO34162Q6UXP9 181 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 HEPN1Q6WQI6 88 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OSR2Q8N2R0 312 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 SYT8Q8NBV8 401 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR4D6Q8NGJ1 314 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR4P4Q8NGL7 312 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 LINC01006Q8NI28 216 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 MUL1Q969V5 352 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TMED9Q9BVK6 235 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 GAL3ST2Q9H3Q3 398 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 BEX1Q9HBH7 125 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TAS2R3Q9NYW6 316 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 KIF25Q9UIL4 384 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 ST3GAL6Q9Y274 331 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 MRPS28Q9Y2Q9 187 aaKnown RBP4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 TPRKBQ9Y3C4 175 aa4.86□□□□□ -1.63
CTDSPL2-204ENST00000558966 ZNF729A6NN14 1252 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 RGS10O43665 173 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CHST1O43916 411 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR7C1O76099 320 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CSTBP04080 98 aaKnown RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 MAPK3P27361 379 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CD34P28906 385 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 GLP1RP43220 463 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 HSPA13P48723 471 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 KRTAP10-3P60369 221 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 SRSF4Q08170 494 aaKnown RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 DYNC1I2Q13409 638 aaKnown RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 MED22Q15528 200 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 SSX2Q16385 188 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 SLC22A6Q4U2R8 563 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 ACSM3Q53FZ2 586 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 PLA1AQ53H76 456 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 LIPKQ5VXJ0 399 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 GLIPR1L1Q6UWM5 242 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 JAGN1Q8N5M9 183 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 SUMF2Q8NBJ7 301 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR13A1Q8NGR1 328 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 THRSPQ92748 146 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CYYR1Q96J86 154 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CNBD2Q96M20 576 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 DPCDQ9BVM2 203 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CLEC7AQ9BXN2 247 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 SLITRK2Q9H156 845 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 NCOR1P1Q9H4R4 102 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 C16orf95Q9H693 158 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 ZNF286AQ9HBT8 521 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 CALYQ9NYX4 217 aa4.85□□□□□ -1.63
CTDSPL2-204ENST00000558966 OR6C3Q9NZP0 311 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms