RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
LRRC28-210ENST00000558879 MRPS28Q9Y2Q9 187 aaKnown RBP13.56□□□□□ -0.24
LRRC28-210ENST00000558879 PEX14O75381 377 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 IGHV3-7P01780 117 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 CELP19835 753 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 GNG10P50151 68 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 CD83Q01151 205 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 MADCAM1Q13477 382 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 DIAPH2-AS1Q14236 149 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 NSUN5P1Q3KNT7 163 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 ABCA11PQ4W5N1 156 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 ZNF497Q6ZNH5 498 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 THNSL2Q86YJ6 484 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 OR8H3Q8N146 312 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 GAPTQ8N292 157 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 JAGN1Q8N5M9 183 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 NKAIN3Q8N8D7 197 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 BPIFB6Q8NFQ5 453 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 OR52M1Q8NGK5 317 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 RFESDQ8TAC1 157 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 THRSPQ92748 146 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 MOB4Q9Y3A3 225 aa13.55□□□□□ -0.24
LRRC28-210ENST00000558879 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 G3V4G9 280 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 M0QZK8 103 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 ORC5O43913 435 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 SNRNP70P08621 437 aaKnown RBP13.54□□□□□ -0.24
LRRC28-210ENST00000558879 GZMHP20718 246 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 RAB7AP51149 207 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 ZNF816Q0VGE8 651 aaPredicted RBP13.54□□□□□ -0.24
LRRC28-210ENST00000558879 LTC4SQ16873 150 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 GLIPR1L1Q6UWM5 242 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 OR56B4Q8NH76 319 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 VCXQ9H320 206 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 SPACA1Q9HBV2 294 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
LRRC28-210ENST00000558879 AIPO00170 330 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 SC5DO75845 299 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 MAS1P04201 325 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 CDK1P06493 297 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 LPLP06858 475 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 MAPK3P27361 379 aaPredicted RBP13.53□□□□□ -0.24
LRRC28-210ENST00000558879 GP2P55259 537 aaKnown RBP13.53□□□□□ -0.24
LRRC28-210ENST00000558879 LOXL3P58215 753 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 EMX1Q04741 257 aaPredicted RBP13.53□□□□□ -0.24
LRRC28-210ENST00000558879 TCTEX1D4Q5JR98 221 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 AWAT2Q6E213 333 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 LINC00311Q8N616 119 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 DRAM1Q8N682 238 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 Q96M66 194 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 OR4F4Q96R69 305 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 GFOD1Q9NXC2 390 aa13.53□□□□□ -0.24
LRRC28-210ENST00000558879 LSM2Q9Y333 95 aaKnown RBP13.53□□□□□ -0.24
LRRC28-210ENST00000558879 SH2D7A6NKC9 451 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-210ENST00000558879 HSD17B6O14756 317 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 MT-ND4P03905 459 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 MGMTP16455 207 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 Q3ZCU0 254 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 TMEM104Q8NE00 496 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 UQCC2Q9BRT2 126 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 MND1Q9BWT6 205 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 NKX1-2Q9UD57 310 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-210ENST00000558879 ERGIC3Q9Y282 383 aa13.52□□□□□ -0.25
LRRC28-210ENST00000558879 A0A1W2PPE3 182 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 SDCBPO00560 298 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-210ENST00000558879 FGF16O43320 207 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 AQP4P55087 323 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 EBI3Q14213 229 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 INSL4Q14641 139 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 TMEM30BQ3MIR4 351 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 SIGIRRQ6IA17 410 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-210ENST00000558879 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 IZUMO1Q8IYV9 350 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 OR10X1Q8NGY0 326 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 NEK7Q8TDX7 302 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 R3HDM4Q96D70 268 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 CYYR1Q96J86 154 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 BANF2Q9H503 90 aa13.51□□□□□ -0.25
LRRC28-210ENST00000558879 C12orf77C9JDV5 145 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 MCRIP1C9JLW8 97 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 ZNF137PP52743 207 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 SLC35A2P78381 396 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms