RNA–Protein interactions for RNA: ENST00000558518.5

LDLR-208, Transcript of low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDLR, Length 3,617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-208ENST00000558518 PTPRSQ13332 1948 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 A0A1W2PNV4 684 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 PDCD6O75340 191 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 HBE1P02100 147 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 OR4A8P0C604 315 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 BCL3P20749 454 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 MAML2Q8IZL2 1156 aaPredicted RBP9.77□□□□□ -0.85
LDLR-208ENST00000558518 MALSU1Q96EH3 234 aa9.77□□□□□ -0.85
LDLR-208ENST00000558518 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 MAP1LC3B2A6NCE7 125 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 AMBPP02760 352 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 GALR1P47211 349 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 RSPO1Q2MKA7 263 aaPredicted RBP9.76□□□□□ -0.85
LDLR-208ENST00000558518 SLC23A3Q6PIS1 610 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 ZDHHC23Q8IYP9 409 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
LDLR-208ENST00000558518 OR5L2Q8NGL0 311 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 OR13D1Q8NGV5 346 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 RASL10BQ96S79 203 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 DDA1Q9BW61 102 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 MAP1LC3BQ9GZQ8 125 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 TMEM222Q9H0R3 208 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 MTCH2Q9Y6C9 303 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 PITX3O75364 302 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 ZNF737O75373 536 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 CRIP3Q6Q6R5 217 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 ADPRHL1Q8NDY3 354 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 PATZ1Q9HBE1 687 aaKnown RBP9.76□□□□□ -0.85
LDLR-208ENST00000558518 Q9N2K0 584 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 LYRM2Q9NU23 88 aaPredicted RBP9.76□□□□□ -0.85
LDLR-208ENST00000558518 PSENENQ9NZ42 101 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 TMEM131Q92545 1883 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 POLEQ07864 2286 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 C5orf67F2Z3F1 127 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 SPINK4O60575 86 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 ALKBH2Q6NS38 261 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 SSX7Q7RTT5 188 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 MCEMP1Q8IX19 187 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 OR4D5Q8NGN0 318 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 MOB3AQ96BX8 217 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 UCK1Q9HA47 277 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 TRIOBPQ9H2D6 2365 aa9.76□□□□□ -0.85
LDLR-208ENST00000558518 CXCL13O43927 109 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 CCL3P10147 92 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 BCL2P10415 239 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 SUCLG1P53597 346 aaKnown RBP9.75□□□□□ -0.85
LDLR-208ENST00000558518 COL19A1Q14993 1142 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 WDR5BQ86VZ2 330 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 ZNF808Q8N4W9 903 aaPredicted RBP9.75□□□□□ -0.85
LDLR-208ENST00000558518 OR2M3Q8NG83 312 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 FGFBP3Q8TAT2 258 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 ATP5SQ99766 215 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 NUDT16L1Q9BRJ7 211 aaKnown RBP9.75□□□□□ -0.85
LDLR-208ENST00000558518 ANAPC10Q9UM13 185 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 GPR179Q6PRD1 2367 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 LILRA5A6NI73 299 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 LRRC3CA6NJW4 275 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
LDLR-208ENST00000558518 GZMBP10144 247 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 PMELP40967 661 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 LTC4SQ16873 150 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 SPATA46Q5T0L3 261 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 AAED1Q7RTV5 226 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 C1QL4Q86Z23 238 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 M1APQ8TC57 530 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 TM2D1Q9BX74 207 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 AQP7P3A6NL99 342 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 DFFBO76075 338 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 S100GP29377 79 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 OR56B2PQ8NGI1 322 aa9.75□□□□□ -0.85
LDLR-208ENST00000558518 ELOA3CA0A087WX78 387 aaPredicted RBP9.74□□□□□ -0.85
LDLR-208ENST00000558518 ARGFXA6NJG6 315 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 C9J4A7 227 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 KRASP01116 189 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 TAS2R30P59541 319 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 FAM78BQ5VT40 261 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 OR1F12Q8NHA8 337 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 SPACA9Q96E40 222 aaPredicted RBP9.74□□□□□ -0.85
LDLR-208ENST00000558518 ARV1Q9H2C2 271 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 PRSS50Q9UI38 385 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 PITPNC1Q9UKF7 332 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 ZNF320A2RRD8 509 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 KIAA1324LA8MWY0 1029 aaPredicted RBP9.74□□□□□ -0.85
LDLR-208ENST00000558518 CARD18P57730 90 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 BAXQ07812 192 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 ZNF441Q8N8Z8 693 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 PHOSPHO2Q8TCD6 241 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 GPR146Q96CH1 333 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
LDLR-208ENST00000558518 LMO7DNF2Z398 122 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
LDLR-208ENST00000558518 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
LDLR-208ENST00000558518 OR10V1Q8NGI7 309 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms