RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 TMEM104Q8NE00 496 aa13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 OR13C9Q8NGT0 318 aa13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 CNIH3Q8TBE1 160 aa13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 ZCCHC4Q9H5U6 513 aa13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 WARS2Q9UGM6 360 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 MRPS28Q9Y2Q9 187 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-204ENST00000558394 TRAV39A0A0B4J263 110 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 TRAV24A0A0B4J272 114 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 A8MZ25 164 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 B2RBV5 119 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 ZNF736B4DX44 427 aaPredicted RBP13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 G3V318 75 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 MT-ND2P03891 347 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 GZMHP20718 246 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 PPIFP30405 207 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 KIR3DL2P43630 455 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 CCDC124Q96CT7 223 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 ASB9Q96DX5 294 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 IL4I1Q96RQ9 567 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 ELOVL1Q9BW60 279 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 PARP11Q9NR21 331 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 C19orf73Q9NVV2 129 aa13.77□□□□□ -0.21
TSPAN3-204ENST00000558394 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 HSPA12AO43301 675 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 IGLV1-40P01703 118 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ARSBP15848 533 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 GALEQ14376 348 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 MMDQ15546 238 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 TP53I3Q53FA7 332 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 OR52M1Q8NGK5 317 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 CANT1Q8WVQ1 401 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ARL11Q969Q4 196 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 MBOAT4Q96T53 435 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ALX4Q9H161 411 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 MYRFQ9Y2G1 1151 aa13.76□□□□□ -0.21
TSPAN3-204ENST00000558394 ATP6V0E1O15342 81 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 DCTN3O75935 186 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 ISG15P05161 165 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 PAX5Q02548 391 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 OR2G2Q8NGZ5 317 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 PLPPR1Q8TBJ4 325 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 RSRP1Q9BUV0 290 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 TNCP24821 2201 aa13.75□□□□□ -0.21
TSPAN3-204ENST00000558394 SLC25A17O43808 307 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 CSTBP04080 98 aaKnown RBP13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 KISS1Q15726 138 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 Q8N1Y9 231 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 TOLLIPQ9H0E2 274 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 TUBA4BQ9H853 241 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 GFOD1Q9NXC2 390 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 STUB1Q9UNE7 303 aa13.74□□□□□ -0.21
TSPAN3-204ENST00000558394 IGHV4OR15-8A0A075B7B6 117 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 A0A087WW49 117 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 IGHV3-43A0A0B4J1X8 118 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 TMEM30CPA0ZSE6 113 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 FAM90A10PA6NDY2 464 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 AQP12BA6NM10 295 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 LGALS1P09382 135 aaKnown RBP13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 IGHV3-43DP0DP04 118 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 HAGHQ16775 308 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 AQP12AQ8IXF9 295 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 CPNE2Q96FN4 548 aaPredicted RBP13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 GPER1Q99527 375 aa13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 DPCDQ9BVM2 203 aaPredicted RBP13.73□□□□□ -0.21
TSPAN3-204ENST00000558394 DAPP51397 102 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 EFNB1P98172 346 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 RSU1Q15404 277 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 ZNF691Q5VV52 312 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 FAHD1Q6P587 224 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 PXT1Q8NFP0 134 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 OR5D14Q8NGL3 314 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 OR10AC1Q8NH08 325 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 FRRS1LQ9P0K9 344 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 ARL2BPQ9Y2Y0 163 aa13.72□□□□□ -0.21
TSPAN3-204ENST00000558394 A0A1W2PN81 502 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 RBMY1BA6NDE4 496 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 RBMY1EA6NEQ0 496 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 ARPC1BO15143 372 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 MAGEB3O15480 346 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 HLA-DRB1P01911 266 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 HSPB1P04792 205 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms