RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 DYRK2Q92630 601 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 PCGF1Q9BSM1 259 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 SLIRPQ9GZT3 109 aaKnown RBP8.6□□□□□ -1.03
LRRC28-204ENST00000558172 NXF2Q9GZY0 626 aaKnown RBP8.6□□□□□ -1.03
LRRC28-204ENST00000558172 HEXA-AS1Q9H8Q6 139 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CHMP1AQ9HD42 196 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-204ENST00000558172 C12orf4Q9NQ89 552 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
LRRC28-204ENST00000558172 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 CDC42EP3Q9UKI2 254 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
LRRC28-204ENST00000558172 TRAV18A0A075B6X5 111 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 FAM25AB3EWG3 89 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 FAM25CB3EWG5 89 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 FAM25GB3EWG6 89 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 NPIPB11E5RHQ5 1161 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 RGS5O15539 181 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 HPGDSO60760 199 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 TPPPO94811 219 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 AVPP01185 164 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
LRRC28-204ENST00000558172 IGHV1-8P0DP01 117 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 ELK1P19419 428 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 CDK2P24941 298 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 MNDAP41218 407 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 GLP1RP43220 463 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 ARFRP1Q13795 201 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 C17orf58Q2M2W7 97 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 TMEM69Q5SWH9 247 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 HEPN1Q6WQI6 88 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 MCFD2Q8NI22 146 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 MRGPRDQ8TDS7 321 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 C15orf40Q8WUR7 153 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 TBX15Q96SF7 602 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 DCUN1D5Q9BTE7 237 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 BEX2Q9BXY8 128 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 MMP27Q9H306 513 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 CALYQ9NYX4 217 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 RABL2AQ9UBK7 228 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-204ENST00000558172 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 KCNK7Q9Y2U2 307 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 SESN1Q9Y6P5 492 aa8.59□□□□□ -1.03
LRRC28-204ENST00000558172 HAX1O00165 279 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 CTDSP2O14595 271 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SPINT2O43291 252 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 CLPXO76031 633 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 FSHBP01225 129 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 MELTFP08582 738 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 RCC1P18754 421 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SRP14P37108 136 aaKnown RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 GNG2P59768 71 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SCGB2A2Q13296 93 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SRSF7Q16629 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 GPR157Q5UAW9 335 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 OLFML2AQ68BL7 652 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 C1orf229Q6ZS94 237 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 Q71RC1 249 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 OR52M1Q8NGK5 317 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 OR13D1Q8NGV5 346 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SETD6Q8TBK2 473 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 TNFRSF14Q92956 283 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 ARL11Q969Q4 196 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 C6orf62Q9GZU0 229 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 AUNIPQ9H7T9 357 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 ZMAT3Q9HA38 289 aaKnown RBP8.58□□□□□ -1.04
LRRC28-204ENST00000558172 Q9N2K0 584 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 SIRT7Q9NRC8 400 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 IDI2-AS1Q9NZ38 188 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 NUP50Q9UKX7 468 aa8.58□□□□□ -1.04
LRRC28-204ENST00000558172 FN1P02751 2386 aaKnown RBP8.57□□□□□ -1.04
LRRC28-204ENST00000558172 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 A0A087X0M5 115 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 TRAV39A0A0B4J263 110 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 CENPVL3A0A0U1RRI6 287 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 A0A1B0GX30 115 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 MEX3AA1L020 520 aaKnown RBP8.57□□□□□ -1.04
LRRC28-204ENST00000558172 C12orf77C9JDV5 145 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 INAFM1C9JVW0 142 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 C15orf65H3BRN8 121 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 F2RL2O00254 374 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 DTYMKP23919 212 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 FPR2P25090 351 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 S100A5P33763 92 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 KIR2DS4P43632 304 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 CBX5P45973 191 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 UBE2E1P51965 193 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 TAS2R20P59543 309 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 KIR2DS1Q14954 304 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 CHRFAM7AQ494W8 412 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 FOXB2Q5VYV0 432 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 BAIAP2L2Q6UXY1 529 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 Q6ZS49 121 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 LHX4Q969G2 390 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 TMEM133Q9H2Q1 129 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms