RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MS4A15Q8N5U1 240 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 TMEM104Q8NE00 496 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 OR10A7Q8NGE5 316 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 WIPF2Q8TF74 440 aaPredicted RBP7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 LEAP2Q969E1 77 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 CREB3L1Q96BA8 519 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 MRPS24Q96EL2 167 aaKnown RBP7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 MND1Q9BWT6 205 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 PRSS22Q9GZN4 317 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 MMP28Q9H239 520 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 MMP27Q9H306 513 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 DUSP21Q9H596 190 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 SCN3BQ9NY72 215 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 RCC2Q9P258 522 aaKnown RBP7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 PSG11Q9UQ72 335 aa7.03□□□□□ -1.28
SNRPA1-206ENST00000558059 TMEM30CPA0ZSE6 113 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A18PA6NE21 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A16PA6NEW6 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A20PA6NIJ5 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A9PA6NNJ1 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A12PA8MX19 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A5PA8MXJ8 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 OOSP1A8MZH6 123 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 H0YHG0 523 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 C15orf65H3BRN8 121 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 SC5DO75845 299 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 AMY1AP04745 511 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 AMY2AP04746 511 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A15PP0C7V4 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A13PP0C7W8 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A14PP0C7W9 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A24PP0C7X0 464 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 VSIG10L2P0DP72 767 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 CD37P11049 281 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 GZMHP20718 246 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 BRS3P32247 399 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 CEACAM3P40198 252 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 VHLP40337 213 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 GPR50Q13585 617 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 RBM39Q14498 530 aaKnown RBP7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 LTC4SQ16873 150 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 AWAT2Q6E213 333 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 SIGIRRQ6IA17 410 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 SLC16A12Q6ZSM3 486 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 Q6ZTK2 550 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 C16orf82Q7Z2V1 217 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 LRRTM1Q86UE6 522 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 GAPTQ8N292 157 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 Q8N3U1 123 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 NKAIN3Q8N8D7 197 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 C11orf44Q8N8P7 122 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 CCDC107Q8WV48 283 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 THRSPQ92748 146 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 CYYR1Q96J86 154 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 Q96M66 194 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 UQCC2Q9BRT2 126 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 ANKRD60Q9BZ19 345 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 WNT10AQ9GZT5 417 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 BANF2Q9H503 90 aa7.02□□□□□ -1.29
SNRPA1-206ENST00000558059 A0A1W2PPE3 182 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A10PA6NDY2 464 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 ERICH4A6NGS2 130 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A7PA6NKC0 464 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM90A23PA8MXZ1 464 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 MCRIP1C9JLW8 97 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 KCNAB3O43448 404 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 ORC5O43913 435 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 CSF1P09603 554 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 MGMTP16455 207 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 CRHBPP24387 322 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 LOXL3P58215 753 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 TPBGQ13641 420 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 DIAPH2-AS1Q14236 149 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 MED22Q15528 200 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 C2orf68Q2NKX9 166 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 TMEM95Q3KNT9 176 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 RAB12Q6IQ22 244 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM53AQ6NSI3 398 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 CEACAM19Q7Z692 300 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 THNSL2Q86YJ6 484 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 OR52M1Q8NGK5 317 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 FAM110DQ8TAY7 271 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 UBALD1Q8TB05 177 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 NEK7Q8TDX7 302 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 PHYHIPQ92561 330 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 ARL11Q969Q4 196 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 RPEQ96AT9 228 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 RBM14Q96PK6 669 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 SLC25A33Q9BSK2 321 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 TMED9Q9BVK6 235 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 SELENOIQ9C0D9 397 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 LIN7BQ9HAP6 207 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 SPACA1Q9HBV2 294 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 TPRKBQ9Y3C4 175 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 AMMECR1Q9Y4X0 333 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 PEX16Q9Y5Y5 336 aa7.01□□□□□ -1.29
SNRPA1-206ENST00000558059 A0A1W2PPI3 338 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms