RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 PLK3Q9H4B4 646 aa10.59□□□□□ -0.71
LDLR-205ENST00000557933 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
LDLR-205ENST00000557933 A0A087WZY1 265 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 A0A087X0M5 115 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 A0A1B0GX30 115 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 KIAA1324LA8MWY0 1029 aaPredicted RBP10.58□□□□□ -0.72
LDLR-205ENST00000557933 RRP8O43159 456 aaKnown RBP10.58□□□□□ -0.72
LDLR-205ENST00000557933 PDCD6O75340 191 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 IGLV3-1P01715 115 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 ARL16Q0P5N6 197 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 FAM189A2Q15884 450 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 OR8G2PQ6IF36 304 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 OR1F12Q8NHA8 337 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 PPP1R3CQ9UQK1 317 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 EXPH5Q8NEV8 1989 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 ZIC3O60481 467 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 PSG2P11465 335 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 CD33P20138 364 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 UCP2P55851 309 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 SUMO3P55854 103 aaPredicted RBP10.58□□□□□ -0.72
LDLR-205ENST00000557933 OR56B2PQ8NGI1 322 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 PLEKHF2Q9H8W4 249 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 RARRES3Q9UL19 164 aa10.58□□□□□ -0.72
LDLR-205ENST00000557933 PTRH2Q9Y3E5 179 aaKnown RBP10.58□□□□□ -0.72
LDLR-205ENST00000557933 SLC22A20A6NK97 555 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 OR5H1A6NKK0 313 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SYNGR1O43759 233 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 LILRA1O75019 489 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SELLP14151 372 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 ALDH3B1P43353 468 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 RBM11P57052 281 aaKnown RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 WIPI1Q5MNZ9 446 aaPredicted RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 ZNF385CQ66K41 422 aaPredicted RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 ZDHHC23Q8IYP9 409 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 HSPA12AO43301 675 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SYNGR3O43761 229 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 H3F3AP84243 136 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 CLN3Q13286 438 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 ARL6IP1Q15041 203 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 P2RY6Q15077 328 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SIGLEC12Q96PQ1 595 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 CABLES2Q9BTV7 478 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 TAAR3PQ9P1P4 343 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 KMT2EQ8IZD2 1858 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SEC14L6B5MCN3 397 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 TK1P04183 234 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 CCL4P13236 92 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SUCLG1P53597 346 aaKnown RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 CNN3Q15417 329 aaKnown RBP10.57□□□□□ -0.72
LDLR-205ENST00000557933 ZNF726P1Q15940 193 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 ZNF787Q6DD87 383 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 STX12Q86Y82 276 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 DECR2Q9NUI1 292 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 OR1A1Q9P1Q5 309 aa10.57□□□□□ -0.72
LDLR-205ENST00000557933 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
LDLR-205ENST00000557933 NGFP01138 241 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 TFF1P04155 84 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 CRYGSP22914 178 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 LMO1P25800 156 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 OTX1P32242 354 aaPredicted RBP10.56□□□□□ -0.72
LDLR-205ENST00000557933 NUBP1P53384 320 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 PAX9P55771 341 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 RAB1AP62820 205 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 CCDC71LQ8N9Z2 235 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 ADPRHL1Q8NDY3 354 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 TMEM37Q8WXS4 190 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 CCDC74BQ96LY2 380 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 RBKSQ9H477 322 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 ERRFI1Q9UJM3 462 aaPredicted RBP10.56□□□□□ -0.72
LDLR-205ENST00000557933 A0A1W2PPQ1 181 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 BTBD17A6NE02 478 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 WDR1O75083 606 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 IL2RGP31785 369 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 LINC00205P59089 165 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 PMP22Q01453 160 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 AAED1Q7RTV5 226 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 RABEPKQ7Z6M1 372 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 SPSB1Q96BD6 273 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 SLC25A22Q9H936 323 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 CACNG5Q9UF02 275 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 LAMP3Q9UQV4 416 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 CADP27708 2225 aa10.56□□□□□ -0.72
LDLR-205ENST00000557933 PITX3O75364 302 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms