RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 IFT22Q9H7X7 185 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 PSG11Q9UQ72 335 aa13.26□□□□□ -0.29
VSX1-207ENST00000557285 AMMECR1Q9Y4X0 333 aaPredicted RBP13.26□□□□□ -0.29
VSX1-207ENST00000557285 IGHV3-43A0A0B4J1X8 118 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 MCRIP1C9JLW8 97 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 FBXO24O75426 580 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 CD1AP06126 327 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 IGHV3-43DP0DP04 118 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 CD28P10747 220 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 MGMTP16455 207 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 MNDAP41218 407 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 GPR50Q13585 617 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 DIAPH2-AS1Q14236 149 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 LIPKQ5VXJ0 399 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 RAB12Q6IQ22 244 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 FAM53AQ6NSI3 398 aaPredicted RBP13.25□□□□□ -0.29
VSX1-207ENST00000557285 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 Q8N2B8 174 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 PRR18Q8N4B5 295 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 NKAIN3Q8N8D7 197 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 OR4K15Q8NH41 348 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 NCOR1P1Q9H4R4 102 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 TRAPPC2LQ9UL33 140 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 LSM2Q9Y333 95 aaKnown RBP13.25□□□□□ -0.29
VSX1-207ENST00000557285 TPRKBQ9Y3C4 175 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 PEX16Q9Y5Y5 336 aa13.25□□□□□ -0.29
VSX1-207ENST00000557285 UBE2QL1A1L167 161 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 NPIPB11E5RHQ5 1161 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 H0YHG0 523 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 SDCBPO00560 298 aaPredicted RBP13.24□□□□□ -0.29
VSX1-207ENST00000557285 MYF6P23409 242 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 SLC35A2P78381 396 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 PAX5Q02548 391 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 HES1Q14469 280 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 ABCA11PQ4W5N1 156 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 C9orf152Q5JTZ5 239 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 RNLSQ5VYX0 342 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 IZUMO2Q6UXV1 221 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 ZNF497Q6ZNH5 498 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 C1QL4Q86Z23 238 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 MS4A15Q8N5U1 240 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 DRAM1Q8N682 238 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 OR56B4Q8NH76 319 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 THRSPQ92748 146 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 UFD1Q92890 307 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 AKR1E2Q96JD6 320 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 VCX3BQ9H321 246 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 SPACA1Q9HBV2 294 aa13.24□□□□□ -0.29
VSX1-207ENST00000557285 C15orf65H3BRN8 121 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 RGS10O43665 173 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 MPIG6BO95866 241 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 MT-ND4P03905 459 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 LPLP06858 475 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 SNRNP70P08621 437 aaKnown RBP13.23□□□□□ -0.29
VSX1-207ENST00000557285 GZMHP20718 246 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 REG1BP48304 166 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 GP2P55259 537 aaKnown RBP13.23□□□□□ -0.29
VSX1-207ENST00000557285 HNF4GQ14541 408 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 NKAPLQ5M9Q1 402 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 SYT6Q5T7P8 510 aaPredicted RBP13.23□□□□□ -0.29
VSX1-207ENST00000557285 OR10K2Q6IF99 312 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 CDH26Q8IXH8 852 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 CFHR4Q92496 578 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
VSX1-207ENST00000557285 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 UQCC2Q9BRT2 126 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 KCNK15Q9H427 330 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 LINC00574Q9H8X3 128 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 LIN7BQ9HAP6 207 aa13.23□□□□□ -0.29
VSX1-207ENST00000557285 A0A1W2PRX2 142 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 OR2F2O95006 317 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 FAM106CPP0CH98 169 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 MAP2K4P45985 399 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 RPS25P62851 125 aaKnown RBP13.22□□□□□ -0.29
VSX1-207ENST00000557285 IRF3Q14653 427 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 HSD17B12Q53GQ0 312 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 UNQ9370/PRO34162Q6UXP9 181 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 C16orf82Q7Z2V1 217 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 LRRTM1Q86UE6 522 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 LYPD6Q86Y78 171 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 OR10A7Q8NGE5 316 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 Q96M66 194 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 RBM14Q96PK6 669 aaKnown RBP13.22□□□□□ -0.29
VSX1-207ENST00000557285 ANKRD60Q9BZ19 345 aa13.22□□□□□ -0.29
VSX1-207ENST00000557285 RCC2Q9P258 522 aaKnown RBP13.22□□□□□ -0.29
VSX1-207ENST00000557285 A0A1W2PPI3 338 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 OOSP1A8MZH6 123 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 C12orf77C9JDV5 145 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 HSD17B6O14756 317 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 GLT8D1Q68CQ7 371 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 MOB3BQ86TA1 216 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 OR1L1Q8NH94 360 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 CITED2Q99967 270 aaPredicted RBP13.21□□□□□ -0.29
VSX1-207ENST00000557285 CST11Q9H112 138 aa13.21□□□□□ -0.29
VSX1-207ENST00000557285 GNG12Q9UBI6 72 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms