RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 LRFN3Q9BTN0 628 aa4.34□□□□□ -1.72
SYNE2-223ENST00000557005 DOK5Q9P104 306 aa4.34□□□□□ -1.72
SYNE2-223ENST00000557005 WNT16Q9UBV4 365 aa4.34□□□□□ -1.72
SYNE2-223ENST00000557005 M0R1B8 84 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 COX7A2P2O60397 106 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 GAPDHP04406 335 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 HSPB1P04792 205 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 FOLR2P14207 255 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CYB561P49447 251 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 RBM11P57052 281 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 COL10A1Q03692 680 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ZP4Q12836 540 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 COTL1Q14019 142 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 SCCPDHQ8NBX0 429 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MRGPRDQ8TDS7 321 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 RFNGQ9Y644 331 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 A6NCN8 305 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 LILRA5A6NI73 299 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 M0QZK8 103 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 HINT1P49773 126 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 HYAL1Q12794 435 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 OR2M3Q8NG83 312 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 RHBDD1Q8TEB9 315 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 SYNGR2O43760 224 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TSPAN2O60636 221 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 APCSP02743 223 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CELA2AP08217 269 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CXCL1P09341 107 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CD81P60033 236 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ACSM6Q6P461 480 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 OR5AU1Q8NGC0 362 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 KCNIP2Q9NS61 270 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TAAR3PQ9P1P4 343 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TUBD1Q9UJT1 453 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 RNF24Q9Y225 148 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TRAV38-1A0A0B4J264 116 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TMEM30CPA0ZSE6 113 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 GRIFINA4D1Z8 144 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MASP2O00187 686 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 PIAS2O75928 621 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 GCGP01275 180 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ROM1Q03395 351 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ELOBQ15370 118 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TEX30Q5JUR7 227 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 SLC23A3Q6PIS1 610 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 C6orf15Q6UXA7 325 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 SLC35E3Q7Z769 313 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TMEM183AQ8IXX5 376 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MRPL30Q8TCC3 161 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 FGF11Q92914 225 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ACY3Q96HD9 319 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ZNF385AQ96PM9 386 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MFRPQ9BY79 579 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 FAM117AQ9C073 453 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 TMEM222Q9H0R3 208 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 PLXNA2O75051 1894 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 DHRS7CA6NNS2 312 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 H0YIZ8 118 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 IGHEP01854 428 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CRISP2P16562 243 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 HOXA5P20719 270 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CEBPDP49716 269 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 ICAM4Q14773 271 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 PLPPR5Q32ZL2 321 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MRPL54Q6P161 138 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 SMIM15Q7Z3B0 74 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 NUFIP2Q7Z417 695 aaKnown RBP4.33□□□□□ -1.72
SYNE2-223ENST00000557005 NHLRC2Q8NBF2 726 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 OR10D3Q8NH80 312 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 CLDND2Q8NHS1 167 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 C22orf15Q8WYQ4 148 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 BOD1Q96IK1 185 aa4.33□□□□□ -1.72
SYNE2-223ENST00000557005 MTCL1Q9Y4B5 1905 aaKnown RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 TMEM14DPA8MWL7 114 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 RRP8O43159 456 aaKnown RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 PGLYRP1O75594 196 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 OR5G3P0C626 314 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 GLB1P16278 677 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 FKBP2P26885 142 aaKnown RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 IZUMO4Q1ZYL8 232 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 C11orf42Q8N5U0 333 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 SSMEM1Q8WWF3 244 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 GPR146Q96CH1 333 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 HSPB9Q9BQS6 159 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 RSPO3Q9BXY4 272 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 RIMS4Q9H426 269 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-223ENST00000557005 OCIAD1Q9NX40 245 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 GOLT1BQ9Y3E0 138 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 DOCK4Q8N1I0 1966 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 PLXNA4Q9HCM2 1894 aa4.32□□□□□ -1.72
SYNE2-223ENST00000557005 KIAA1671Q9BY89 1806 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms