RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 OPN1MW3P0DN78 364 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 HIST1H1DP16402 221 aaKnown RBP10.4□□□□□ -0.74
PSEN1-219ENST00000556951 BCL3P20749 454 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 BLVRBP30043 206 aaPredicted RBP10.4□□□□□ -0.74
PSEN1-219ENST00000556951 CFHR2P36980 270 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 CD200P41217 278 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 NPBWR2P48146 333 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 TMEM50BP56557 158 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 AP3S2P59780 193 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 SSBP1Q04837 148 aaKnown RBP10.4□□□□□ -0.74
PSEN1-219ENST00000556951 PNLIPRP3Q17RR3 467 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 RNASE12Q5GAN4 147 aaKnown RBP10.4□□□□□ -0.74
PSEN1-219ENST00000556951 NHLRC3Q5JS37 347 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.74
PSEN1-219ENST00000556951 MZT2BQ6NZ67 158 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 Q6ZTK2 550 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 WDR86Q86TI4 376 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 Q8IYB0 196 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 OR10AD1Q8NGE0 317 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 GPX8Q8TED1 209 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 SEH1LQ96EE3 360 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
PSEN1-219ENST00000556951 LCE6AA0A183 80 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 LINC00854A0A1B0GVQ3 168 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 MEIOCA2RUB1 952 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 IFNL4K9M1U5 179 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PLA2G10O15496 165 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-219ENST00000556951 CA11O75493 328 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PTBP3O95758 552 aaKnown RBP10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PTTG1O95997 202 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 LPLP06858 475 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PTHLHP12272 177 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 GNB3P16520 340 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 GDNFP39905 211 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 RBM11P57052 281 aaKnown RBP10.39□□□□□ -0.75
PSEN1-219ENST00000556951 MAB21L1Q13394 359 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 OXA1LQ15070 435 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 TRIM16LQ309B1 348 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 CENPSQ8N2Z9 138 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 TOMM5Q8N4H5 51 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 CELF2-AS1Q8N7Q2 184 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 MEGF10Q96KG7 1140 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PCGF1Q9BSM1 259 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 PECRQ9BY49 303 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 GAR1Q9NY12 217 aaKnown RBP10.39□□□□□ -0.75
PSEN1-219ENST00000556951 TAS2R8Q9NYW2 309 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 MTFP1Q9UDX5 166 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 HSF4Q9ULV5 492 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 ST3GAL6Q9Y274 331 aa10.39□□□□□ -0.75
PSEN1-219ENST00000556951 DNAH7Q8WXX0 4024 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 IGHV1-69DA0A0B4J2H0 117 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 CENPXA8MT69 81 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 CDIPTO14735 213 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 GPR37O15354 613 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 IGHV1-69P01742 117 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 GABRR1P24046 479 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 SRP9P49458 86 aaKnown RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 DYRK1AQ13627 763 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 KLF9Q13886 244 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 Q6ZNX1 250 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 DCDC5Q6ZRR9 648 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 GDPD3Q7L5L3 318 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 LINC00596Q86U02 117 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 FAM58AQ8N1B3 248 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 OR8B3Q8NGG8 313 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 DEDD2Q8WXF8 326 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 NEDD4LQ96PU5 975 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 OR8B2Q96RD0 313 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 NRIP2Q9BQI9 281 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 C7orf50Q9BRJ6 194 aaKnown RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 SIRPDQ9H106 197 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 NECAP2Q9NVZ3 263 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 RBFOX1Q9NWB1 397 aaKnown RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 KLK11Q9UBX7 282 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 CLN8Q9UBY8 286 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 ZNF107Q9UII5 783 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-219ENST00000556951 STAB2Q8WWQ8 2551 aa10.38□□□□□ -0.75
PSEN1-219ENST00000556951 IGHV3-64DA0A0J9YX35 117 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 TMEM235A6NFC5 223 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 SERPINE3A8MV23 424 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 F8VVB4 439 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 F8VWA3 439 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 MFNGO00587 321 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 GEMIN2O14893 280 aaKnown RBP10.37□□□□□ -0.75
PSEN1-219ENST00000556951 LYRM1O43325 122 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 FCN3O75636 299 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 RHBDL1O75783 438 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 TOX4O94842 621 aa10.37□□□□□ -0.75
PSEN1-219ENST00000556951 FUT3P21217 361 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms