RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GABRA4P48169 554 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 SLC35E3Q7Z769 313 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 TRAV39A0A0B4J263 110 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 A0A0J9YW62 118 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 FABP6P51161 128 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 RANP62826 216 aaKnown RBP13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 RFESDQ8TAC1 157 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 ANAPC16Q96DE5 110 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 CA11O75493 328 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 CYB5R3P00387 301 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 EPHA8P29322 1005 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 TAS2R45P59539 299 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 IL22RA2Q969J5 263 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 GPHA2Q96T91 129 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 GGACTQ9BVM4 153 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 GPR61Q9BZJ8 451 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 MMP9P14780 707 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 ARL3P36405 182 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 MPC1Q9Y5U8 109 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 DEFB108AA8MXU0 73 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 CLN5O75503 358 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR3A1P47881 315 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR4A4PQ8NGN8 299 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 ZNF665Q9H7R5 613 aa13.05□□□□□ -0.32
ARHGEF40-207ENST00000556399 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 C11orf94C9JXX5 98 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 FBP1P09467 338 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 SCTP09683 121 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 PAQR4Q8N4S7 273 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 DMRT1Q9Y5R6 373 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 LOC390937A0A1W2PQ73 354 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 CCKARP32238 428 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 PSG4Q00888 419 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 Q3ZCU0 254 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 RHOVQ96L33 236 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 FAM186AA6NE01 2351 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 F2RP25116 425 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 SMIM21Q3B7S5 101 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 M1APQ8TC57 530 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 VWCEQ96DN2 955 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
ARHGEF40-207ENST00000556399 M0R1X1 148 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 MST1P26927 711 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 C16orf82Q7Z2V1 217 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 GINS3Q9BRX5 216 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 TCAPO15273 167 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 PAGE4O60829 102 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 FCGR3BO75015 233 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM230Q96A57 120 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 SLC35E1Q96K37 410 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 H0Y8G0 127 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 M0R143 59 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 PMELP40967 661 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 PLA2G3Q9NZ20 509 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
ARHGEF40-207ENST00000556399 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 IGHV3-43A0A0B4J1X8 118 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 IGHV3-43DP0DP04 118 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 PMCHP20382 165 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 MPZP25189 248 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 UBE2G1P62253 170 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 EIF3IQ13347 325 aaKnown RBP13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 FAM117AQ9C073 453 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 IGHV5-10-1A0A0J9YXX1 117 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR1C1Q15619 314 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 ASPHD2Q6ICH7 369 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 SELENOHQ8IZQ5 122 aaKnown RBP13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 CMTM2Q8TAZ6 248 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 DTD1Q8TEA8 209 aa13.02□□□□□ -0.32
ARHGEF40-207ENST00000556399 CXorf65A6NEN9 183 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 H0Y980 276 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 FCN1O00602 326 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 SPINK4O60575 86 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 SERF2P84101 59 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNF488Q96MN9 340 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 CELA2AP08217 269 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 PGA5P0DJD9 388 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 BOD1Q96IK1 185 aa13.02□□□□□ -0.33
ARHGEF40-207ENST00000556399 CEP290O15078 2479 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms