RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CTDSP2O14595 271 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 ORC5O43913 435 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 CLPXO76031 633 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 AVPP01185 164 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 CGB3P0DN86 165 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 CGB7P0DN87 165 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 GNG2P59768 71 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 FAM120AOSQ5T036 256 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 NCR3LG1Q68D85 454 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 OR52W1Q6IF63 320 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 OR10A7Q8NGE5 316 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 NANPQ8TBE9 248 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 CYYR1Q96J86 154 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 TBX15Q96SF7 602 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 AUNIPQ9H7T9 357 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 LINC00574Q9H8X3 128 aa11.72□□□□□ -0.53
CHD8-208ENST00000555301 HIVEP1P15822 2718 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TMEM235A6NFC5 223 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 SPINT2O43291 252 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TPPPO94811 219 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 MELTFP08582 738 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 RCC1P18754 421 aaPredicted RBP11.71□□□□□ -0.53
CHD8-208ENST00000555301 DTYMKP23919 212 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 SSTR5P35346 364 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TAS2R20P59543 309 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 C17orf58Q2M2W7 97 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 ZNF880Q6PDB4 577 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
CHD8-208ENST00000555301 Q71RC1 249 aaPredicted RBP11.71□□□□□ -0.53
CHD8-208ENST00000555301 LAX1Q8IWV1 398 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 SETD6Q8TBK2 473 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 ARL11Q969Q4 196 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 HDHD3Q9BSH5 251 aaPredicted RBP11.71□□□□□ -0.53
CHD8-208ENST00000555301 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 TAF9BQ9HBM6 251 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 SESN1Q9Y6P5 492 aa11.71□□□□□ -0.53
CHD8-208ENST00000555301 C12orf77C9JDV5 145 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 FCGR3AP08637 254 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 S100A5P33763 92 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 SRSF7Q16629 238 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHD8-208ENST00000555301 GPR157Q5UAW9 335 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 IZUMO1Q8IYV9 350 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 OR13D1Q8NGV5 346 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 TNFRSF14Q92956 283 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 LHX4Q969G2 390 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 BEX2Q9BXY8 128 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 Q9N2K0 584 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
CHD8-208ENST00000555301 ELF5Q9UKW6 265 aaPredicted RBP11.7□□□□□ -0.54
CHD8-208ENST00000555301 RABL2BQ9UNT1 228 aa11.7□□□□□ -0.54
CHD8-208ENST00000555301 MRPS7Q9Y2R9 242 aaKnown RBP11.7□□□□□ -0.54
CHD8-208ENST00000555301 ABCA2Q9BZC7 2435 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 INAFM1C9JVW0 142 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 OMGP23515 440 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 FPR2P25090 351 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
CHD8-208ENST00000555301 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 BPIFB3P59826 476 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 HMGN3Q15651 99 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
CHD8-208ENST00000555301 DTX3Q8N9I9 347 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 OR52M1Q8NGK5 317 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 RFESDQ8TAC1 157 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 DIRAS2Q96HU8 199 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 TMEM133Q9H2Q1 129 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
CHD8-208ENST00000555301 ACANP16112 2415 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 CENPVL3A0A0U1RRI6 287 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 RNASEK-C17orf49H0YIS7 233 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 F2RL2O00254 374 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 MMP23AO75900 390 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 FSHBP01225 129 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 HLA-DQB1P01920 261 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 HBZP02008 142 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 HOXB4P17483 251 aaPredicted RBP11.68□□□□□ -0.54
CHD8-208ENST00000555301 PRSS3P35030 304 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 CBX5P45973 191 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 UBE2E1P51965 193 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms