RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 S100A13Q99584 98 aa12.52□□□□□ -0.41
GABRB3-207ENST00000554722 BANF2Q9H503 90 aa12.52□□□□□ -0.41
GABRB3-207ENST00000554722 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
GABRB3-207ENST00000554722 MRPS28Q9Y2Q9 187 aaKnown RBP12.52□□□□□ -0.41
GABRB3-207ENST00000554722 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A18PA6NE21 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A16PA6NEW6 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A20PA6NIJ5 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A9PA6NNJ1 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A12PA8MX19 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A5PA8MXJ8 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 OR2F2O95006 317 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 CD1AP06126 327 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 CDK1P06493 297 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 LPLP06858 475 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A15PP0C7V4 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A13PP0C7W8 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A14PP0C7W9 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM90A24PP0C7X0 464 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 GTF2F2P13984 249 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 BRS3P32247 399 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 AQP4P55087 323 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 TAS2R43P59537 309 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 RBMXL1Q96E39 390 aaKnown RBP12.51□□□□□ -0.41
GABRB3-207ENST00000554722 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 LIN7BQ9HAP6 207 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 CKLFQ9UBR5 152 aa12.51□□□□□ -0.41
GABRB3-207ENST00000554722 LSM2Q9Y333 95 aaKnown RBP12.51□□□□□ -0.41
GABRB3-207ENST00000554722 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-207ENST00000554722 MT-ND4P03905 459 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
GABRB3-207ENST00000554722 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 CEACAM3P40198 252 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 LOXL3P58215 753 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 TCTEX1D4Q5JR98 221 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 SIGIRRQ6IA17 410 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 UNQ9370/PRO34162Q6UXP9 181 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 C16orf82Q7Z2V1 217 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 LINC00596Q86U02 117 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 DRAM1Q8N682 238 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 OR56B4Q8NH76 319 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 CAPSLQ8WWF8 208 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 RPEQ96AT9 228 aa12.5□□□□□ -0.41
GABRB3-207ENST00000554722 RCC2Q9P258 522 aaKnown RBP12.5□□□□□ -0.41
GABRB3-207ENST00000554722 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 OOSP1A8MZH6 123 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 ZNF497Q6ZNH5 498 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 OR10A7Q8NGE5 316 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 CREB3L1Q96BA8 519 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
GABRB3-207ENST00000554722 SLC31A2O15432 143 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 MGMTP16455 207 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 GZMHP20718 246 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 MNDAP41218 407 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 REG1BP48304 166 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 CD83Q01151 205 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-207ENST00000554722 GPR176Q14439 515 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 IRF3Q14653 427 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 CCDC144NLQ6NUI1 221 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 PHF21AQ96BD5 680 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 SELENOIQ9C0D9 397 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 KCNK15Q9H427 330 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-207ENST00000554722 GFOD1Q9NXC2 390 aa12.48□□□□□ -0.41
GABRB3-207ENST00000554722 AMMECR1Q9Y4X0 333 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-207ENST00000554722 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 C12orf77C9JDV5 145 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 AIPO00170 330 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 CD33P20138 364 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 MADCAM1Q13477 382 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 C9orf152Q5JTZ5 239 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 SYT6Q5T7P8 510 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-207ENST00000554722 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 LRRTM1Q86UE6 522 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 CDH26Q8IXH8 852 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 Q96M66 194 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 TMED9Q9BVK6 235 aa12.47□□□□□ -0.41
GABRB3-207ENST00000554722 VCXQ9H320 206 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms