RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
SHOX2-206ENST00000554685 HMGN3Q15651 99 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 CLEC12BQ2HXU8 276 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 RGS21Q2M5E4 152 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 OR52W1Q6IF63 320 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
SHOX2-206ENST00000554685 CORO2AQ92828 525 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 CYYR1Q96J86 154 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 HRASLSQ9HDD0 168 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
SHOX2-206ENST00000554685 LINC00312Q9Y6C7 94 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 UTP20O75691 2785 aaKnown RBP11.92□□□□□ -0.5
SHOX2-206ENST00000554685 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 PLA2G10O15496 165 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 PTTG1O95997 202 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
SHOX2-206ENST00000554685 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
SHOX2-206ENST00000554685 PRSS57Q6UWY2 283 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 TPRX1Q8N7U7 411 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 OR4C16Q8NGL9 310 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 PRRT1Q99946 306 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
SHOX2-206ENST00000554685 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 MCUBQ9NWR8 336 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 TAS2R3Q9NYW6 316 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 EHFQ9NZC4 300 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 SCP2D1Q9UJQ7 156 aa11.91□□□□□ -0.5
SHOX2-206ENST00000554685 GCN1Q92616 2671 aaKnown RBP11.91□□□□□ -0.5
SHOX2-206ENST00000554685 USF3Q68DE3 2245 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
SHOX2-206ENST00000554685 M0QYG6 137 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 PMP2P02689 132 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 AMY2AP04746 511 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 IL2RGP31785 369 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 TSPAN5P62079 268 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 ZNF782Q6ZMW2 699 aaPredicted RBP11.9□□□□□ -0.5
SHOX2-206ENST00000554685 Q6ZPA2 131 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 OR13A1Q8NGR1 328 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 ENKURQ8TC29 256 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 ARL11Q969Q4 196 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 GALMQ96C23 342 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 DMRTB1Q96MA1 342 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 C11orf54Q9H0W9 315 aaPredicted RBP11.9□□□□□ -0.5
SHOX2-206ENST00000554685 NARFLQ9H6Q4 476 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
SHOX2-206ENST00000554685 IGKV1D-8A0A087WSZ0 117 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 FAM240BA0A1B0GVZ2 78 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 C12orf77C9JDV5 145 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 GSTT2P0CG29 244 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 OR5H8P0DN80 308 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 SEC61A1P61619 476 aaKnown RBP11.89□□□□□ -0.51
SHOX2-206ENST00000554685 OVCH2Q7RTZ1 564 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 C8orf46Q8TAG6 207 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 GINS4Q9BRT9 223 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
SHOX2-206ENST00000554685 DPAGT1Q9H3H5 408 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 CALYQ9NYX4 217 aa11.89□□□□□ -0.51
SHOX2-206ENST00000554685 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 TRAV39A0A0B4J263 110 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 A8MXK9 166 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 NPIPB11E5RHQ5 1161 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 HSPA12AO43301 675 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 FOXH1O75593 365 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 HBZP02008 142 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 SCTP09683 121 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 ECI1P42126 302 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 RFX2P48378 723 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 HTD2P86397 168 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 BTN2A1Q7KYR7 527 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 OR10A7Q8NGE5 316 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 OR6F1Q8NGZ6 308 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 OR10J5Q8NHC4 309 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 C19orf12Q9NSK7 152 aa11.88□□□□□ -0.51
SHOX2-206ENST00000554685 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
SHOX2-206ENST00000554685 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 hCG_1809904A0A1W2PP81 198 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 A0A1W2PPE2 198 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 A0A1W2PR64 198 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 A0A1W2PRV1 198 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms