RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ASAH2BP0C7U1 165 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 CD99P14209 185 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 BMI1P35226 326 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 PRSS12P56730 875 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 ZP4Q12836 540 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 TMEM52Q8NDY8 209 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 RAB24Q969Q5 203 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
VTI1B-204ENST00000554659 HSF4Q9ULV5 492 aa12.23□□□□□ -0.45
VTI1B-204ENST00000554659 J3QT63 122 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 CORTO00230 105 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 TGIF2LYQ8IUE0 185 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 OR1B1Q8NGR6 318 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 PITPNC1Q9UKF7 332 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 TRIP11Q15643 1979 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 HAND1O96004 215 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 PSG5Q15238 335 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 C1QTNF12Q5T7M4 302 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 BPIFA4PQ86YQ2 179 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 C9orf40Q8IXQ3 194 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 TMEM208Q9BTX3 173 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
VTI1B-204ENST00000554659 MRPS11P82912 194 aaKnown RBP12.22□□□□□ -0.45
VTI1B-204ENST00000554659 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 TMEM38BQ9NVV0 291 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 DTX4Q9Y2E6 619 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 K7ERU9 68 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 GAPDHP04406 335 aaKnown RBP12.22□□□□□ -0.45
VTI1B-204ENST00000554659 ERGP11308 486 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 TMEM50BP56557 158 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 HERVK_113P61574 105 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 RPL30P62888 115 aaKnown RBP12.22□□□□□ -0.45
VTI1B-204ENST00000554659 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 LHX9Q9NQ69 397 aa12.22□□□□□ -0.45
VTI1B-204ENST00000554659 RAB29O14966 203 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 NUP214P35658 2090 aaPredicted RBP12.21□□□□□ -0.45
VTI1B-204ENST00000554659 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 P01737 135 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 NGFRP08138 427 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 PGA5P0DJD9 388 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
VTI1B-204ENST00000554659 IER3P46695 156 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 PRRX1P54821 245 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 PIGYQ3MUY2 71 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 OR4P4Q8NGL7 312 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 GPR35Q9HC97 309 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.45
VTI1B-204ENST00000554659 AMMECR1Q9Y4X0 333 aaPredicted RBP12.21□□□□□ -0.45
VTI1B-204ENST00000554659 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 MS4A18H0YCH9 400 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 FOXS1O43638 330 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 DEDDO75618 318 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 COL8A1P27658 744 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 RFLNBQ8N5W9 214 aa12.21□□□□□ -0.45
VTI1B-204ENST00000554659 SNURFLB1AK76 121 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 DXOO77932 396 aaKnown RBP12.21□□□□□ -0.46
VTI1B-204ENST00000554659 IGKV1D-16P01601 117 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 CSRP3P50461 194 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 MGAT2Q10469 447 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 GAB4Q2WGN9 574 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 LRRC75AQ8NAA5 344 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF721Q8TF20 911 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.46
VTI1B-204ENST00000554659 IFITM10A6NMD0 228 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 SPINT1O43278 529 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 GZMHP20718 246 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 SMUG1Q53HV7 270 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 MRGPRFQ96AM1 343 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 THYN1Q9P016 225 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 FAM157CP0CG43 387 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 PAGE4O60829 102 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 DLX1P56177 255 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 OR2D3Q8NGH3 330 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 ATG101Q9BSB4 218 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 CLEC1BQ9P126 229 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 RP1P56715 2156 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 PNLIPP16233 465 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 COX7A1P24310 79 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 UBE2V2Q15819 145 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 HFEQ30201 348 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 TUSC5Q8IXB3 177 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
VTI1B-204ENST00000554659 GRAMD2BQ96HH9 432 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 LY75O60449 1722 aa12.2□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF660Q6AZW8 331 aaPredicted RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms