RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CALHM1Q8IU99 346 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR4A5Q8NH83 315 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 GABARAPL3Q9BY60 117 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FRRS1LQ9P0K9 344 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TIAM2Q8IVF5 1701 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LOC390937A0A1W2PQ73 354 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 AANATQ16613 207 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FBLN7Q53RD9 439 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ABLIM2Q6H8Q1 611 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR4X1Q8NH49 305 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 C20orf85Q9H1P6 137 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PLEKHF2Q9H8W4 249 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ASB1Q9Y576 335 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 XIRP1Q702N8 1843 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FDXRP22570 491 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR10J3Q5JRS4 329 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SPICQ8N5J4 248 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CADM4Q8NFZ8 388 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR8B3Q8NGG8 313 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR56B1Q8NGI3 324 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR8B2Q96RD0 313 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CHST5Q9GZS9 411 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DNAJC4Q9NNZ3 241 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ACP2P11117 423 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 GATD1Q8NB37 220 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CHST1O43916 411 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LYSMD2Q8IV50 215 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SLC22A24Q8N4F4 322 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 C1QTNF2Q9BXJ5 285 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 HERVK_113P61574 105 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RNF212Q495C1 297 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 C15orf39Q6ZRI6 1047 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM106AQ96A25 262 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 NTNG2Q96CW9 530 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ERGP11308 486 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RAB40BQ12829 278 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DUSP8Q13202 625 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SELENBP1Q13228 472 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 MMDQ15546 238 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SLC23A3Q6PIS1 610 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 NKAIN3Q8N8D7 197 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF485Q8NCK3 441 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR2V1Q8NHB1 315 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SLC52A3Q9NQ40 469 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CORINQ9Y5Q5 1042 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 HNRNPA1P09651 372 aaKnown RBP eCLIP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 HIST3H3Q16695 136 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 HNRNPA1L2Q32P51 320 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF658BQ4V348 819 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR5A1Q8NGJ0 315 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM163Q8TC26 289 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CHCHD5Q9BSY4 110 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CRISP2P16562 243 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR2D3Q8NGH3 330 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TM4SF18Q96CE8 201 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TAAR9Q96RI9 348 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SORT1Q99523 831 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ACPTQ9BZG2 426 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ST3GAL6Q9Y274 331 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CA1P00915 261 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 MAGEA5P43359 124 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CLPSL2Q6UWE3 100 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF620Q6ZNG0 422 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ISCA2Q86U28 154 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FAM3DQ96BQ1 224 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ATP5SQ99766 215 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CRIM1Q9NZV1 1036 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PHRF1Q9P1Y6 1649 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LAMB2P55268 1798 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TRGV2A0A075B6R0 118 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 IGKV6D-41A0A0C4DH26 115 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 hCG_38984A0A1B0GV85 526 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PRRX1P54821 245 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DLX6P56179 175 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RPL18Q07020 188 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 STPG1Q5TH74 334 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PWWP2BQ6NUJ5 590 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DPPA3Q6W0C5 159 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DYNC2LI1Q8TCX1 351 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ITLN1Q8WWA0 313 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SMIM7Q9BQ49 75 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PIK3C2AO00443 1686 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 GPX1P07203 203 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RAB40ALP0C0E4 278 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SDHAP31040 664 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SPANXN1Q5VSR9 72 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FAM71F2Q6NXP2 309 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM251Q8N6I4 163 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RAB40AQ8WXH6 277 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 MESP1Q9BRJ9 268 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FLVCR1Q9Y5Y0 555 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 AGRNO00468 2067 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 TRAV36DV7A0A075B6V5 113 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 XKRY2A2RUG3 117 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 G3V2L1 256 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 TSPAN2O60636 221 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 MRPS14O60783 128 aaKnown RBP2.9□□□□□ -1.94
SYNE2-212ENST00000554584 MALP21145 153 aa2.9□□□□□ -1.94
SYNE2-212ENST00000554584 MRPS11P82912 194 aaKnown RBP2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms