RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LINC00477Q96M19 166 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GFI1Q99684 422 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SYT3Q9BQG1 590 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PTGES2Q9H7Z7 377 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PELI2Q9HAT8 420 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ACKR4Q9NPB9 350 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SIGLEC8Q9NYZ4 499 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 C1RLQ9NZP8 487 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GALPQ9UBC7 116 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TESQ9UGI8 421 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 STEAP1Q9UHE8 339 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RAB22AQ9UL26 194 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZFP30Q9Y2G7 519 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 FBXO7Q9Y3I1 522 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 U3KQ87 197 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 NINQ8N4C6 2090 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SLC22A23A1A5C7 686 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MAP1LC3B2A6NCE7 125 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM231BA6NCW3 169 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A6NIN4 97 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM200CA6NKL6 621 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A8MT66 165 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 B5MCH6 92 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SIRPB1O00241 398 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR7A17O14581 309 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR1I1O60431 355 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GALR3O60755 368 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 IFNA17P01571 189 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 UBBP0CG47 229 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SDC1P18827 310 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FASP25445 335 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CLRN1P58418 232 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RPL31P62899 125 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 IGLV3-21P80748 117 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RUNX1Q01196 453 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 EMX1Q04741 257 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 BAXQ07812 192 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF763Q0D2J5 394 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SPHARQ15513 63 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZSWIM7Q19AV6 140 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MS4A18Q3C1V0 323 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ATP6AP1LQ52LC2 224 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 Q5BKY6 102 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TPTE2P1Q5T6R2 138 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST2H3PS2Q5TEC6 136 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM71E1Q6IPT2 247 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RASSF6Q6ZTQ3 369 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM19A1Q7Z5A9 133 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 C10orf111Q8N326 155 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 KRTCAP2Q8N6L1 136 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 THAP8Q8NA92 274 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR1J2Q8NGS2 313 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR10A6Q8NH74 314 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TFAP2CQ92754 450 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RBPMSQ93062 196 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GNRHR2Q96P88 292 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 LPAR4Q99677 370 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 KCTD14Q9BQ13 255 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM173AQ9BQD7 235 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MAP1LC3BQ9GZQ8 125 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 NXF2Q9GZY0 626 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF696Q9H7X3 374 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 EXOSC4Q9NPD3 245 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MCUBQ9NWR8 336 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MED29Q9NX70 200 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CALML5Q9NZT1 146 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 DNAJC15Q9Y5T4 150 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 WSB1Q9Y6I7 421 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TEP1Q99973 2627 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 F8P00451 2351 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TRAV18A0A075B6X5 111 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A0A087WXM4 84 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A0A0B4J2E0 115 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1B0GTI1 187 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1B0GX12 115 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1W2PRE2 83 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FOXI3A8MTJ6 420 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 C1orf196B1AJZ1 125 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 F5H5K5 113 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SLC17A3O00476 420 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TNFRSF13BO14836 293 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MLNRO43193 412 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SPRY3O43610 288 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 EIF4E2O60573 245 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 NCR1O76036 304 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OPN1SWP03999 348 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CELA2AP08217 269 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H2AGP0C0S8 130 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GLI4P10075 376 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CD37P11049 281 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 IRF2P14316 349 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H1CP16403 213 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GPX2P18283 190 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 AZU1P20160 251 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FGF7P21781 194 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 IMPA1P29218 277 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RPL4P36578 427 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms