RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ALDOBP05062 364 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 CSN2P05814 226 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 CALCBP10092 127 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 ZNF44P15621 663 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 COX7A1P24310 79 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 LMO1P25800 156 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 RFX2P48378 723 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 RAG2P55895 527 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 SCAND1P57086 179 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 AANATQ16613 207 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 ZNF782Q6ZMW2 699 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-211ENST00000554310 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 OR5H6Q8NGV6 325 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 OR4F5Q8NH21 305 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 TNFAIP8L1Q8WVP5 186 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 MMP24Q9Y5R2 645 aa10.64□□□□□ -0.71
SHMT2-211ENST00000554310 POM121CA8CG34 1229 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 PLA2G10O15496 165 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
SHMT2-211ENST00000554310 FSTP19883 344 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 BDKRB2P30411 391 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 PITPNAQ00169 270 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 TAF9Q16594 264 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 UBE2NLQ5JXB2 153 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 SHISA2Q6UWI4 295 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 ASCL4Q6XD76 172 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 TRAPPC6BQ86SZ2 158 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 OR13D1Q8NGV5 346 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 IL36GQ9NZH8 169 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 UBE2J1Q9Y385 318 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-211ENST00000554310 ETV7Q9Y603 341 aa10.63□□□□□ -0.71
SHMT2-211ENST00000554310 TRGV10A0A0A0MS01 117 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 ODF3BA8MYP8 253 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 SLC33A1O00400 549 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 CTDSPLO15194 276 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 IGFBP3P17936 291 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 ZNF93P35789 620 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 OR3A4PP47883 348 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 LGALS4P56470 323 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 RELBQ01201 579 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 IL13RA2Q14627 380 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 RSU1Q15404 277 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 LRRC75BQ2VPJ9 315 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 MZT2BQ6NZ67 158 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 Q6P435 159 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 TPRX1Q8N7U7 411 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 Q8NFD4 153 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 OR51T1Q8NGJ9 327 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 FOXRED1Q96CU9 486 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 GAL3ST2Q9H3Q3 398 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 BEX1Q9HBH7 125 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 FOXJ3Q9UPW0 622 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 TBL2Q9Y4P3 447 aaKnown RBP10.62□□□□□ -0.71
SHMT2-211ENST00000554310 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
SHMT2-211ENST00000554310 MEX3AA1L020 520 aaKnown RBP10.61□□□□□ -0.71
SHMT2-211ENST00000554310 DEGS1O15121 323 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 ZNF780AO75290 641 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-211ENST00000554310 TPPPO94811 219 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 OMGP23515 440 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 PTGFRP43088 359 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 RANBP1P43487 201 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 INPP1P49441 399 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 NHLRC3Q5JS37 347 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 HES5Q5TA89 166 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 DHRS7BQ6IAN0 325 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-211ENST00000554310 C17orf50Q8WW18 174 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 TAF15Q92804 592 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHMT2-211ENST00000554310 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 S100A13Q99584 98 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 MEGF9Q9H1U4 602 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 ABCG5Q9H222 651 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 TAS2R3Q9NYW6 316 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 KIAA2026Q5HYC2 2103 aa10.61□□□□□ -0.71
SHMT2-211ENST00000554310 TRAV8-7A0A075B6U6 113 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 A0A0B4J203 849 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 ODAMA1E959 279 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 CLPSL1A2RUU4 121 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 FAM90A8PA6NJQ4 464 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 H3BUX3 64 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 LYRM1O43325 122 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 GSTZ1O43708 216 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-211ENST00000554310 ARG1P05089 322 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 CD37P11049 281 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 MNDAP41218 407 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 KCNJ3P48549 501 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 PAX5Q02548 391 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 AESQ08117 197 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 MADCAM1Q13477 382 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms