RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ZNF708P17019 499 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 SFTPDP35247 375 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 TAGLN2P37802 199 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 RPS27P42677 84 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 NPY4RP50391 375 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 MTCP1P56278 107 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM33P57088 247 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 PNRC1Q12796 327 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 SLC9A3R2Q15599 337 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 NSDHLQ15738 373 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ANKRD55Q3KP44 614 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ACSF3Q4G176 576 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ABCA11PQ4W5N1 156 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 AWAT1Q58HT5 328 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 PLAC9Q5JTB6 97 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 RPL7L1Q6DKI1 246 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 RPUSD3Q6P087 351 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 COMMD2Q86X83 199 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OR5AS1Q8N127 324 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 WDSUB1Q8N9V3 476 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 GJC3Q8NFK1 279 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OR51T1Q8NGJ9 327 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OR2Y1Q8NGV0 311 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OR13G1Q8NGZ3 307 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 HAS2Q92819 552 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 SPTSSAQ969W0 71 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ADAT3Q96EY9 351 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 C1orf147Q96MC9 270 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OXGR1Q96P68 337 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 CMSS1Q9BQ75 279 aaKnown RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 PECRQ9BY49 303 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 CHST5Q9GZS9 411 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 NAA60Q9H7X0 242 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FN3KRPQ9HA64 309 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 C19orf12Q9NSK7 152 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 OR5AC2Q9NZP5 309 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 KIAA1456Q9P272 454 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FBXL17Q9UF56 701 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ANXA10Q9UJ72 324 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 V9GYS6 101 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 TRGV8A0A0C4DH27 118 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 LRP5LA4QPB2 252 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF729A6NN14 1252 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF726A6NNF4 738 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SEC14L6B5MCN3 397 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 F5H697 171 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 M0R036 132 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ADAP1O75689 374 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 HSPB1P04792 205 aaKnown RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SERPINA5P05154 406 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SFTPBP07988 381 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 FREM3P0C091 2139 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 PGA4P0DJD7 388 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 PGA3P0DJD8 388 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF44P15621 663 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 LMO1P25800 156 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 S100GP29377 79 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 BLVRBP30043 206 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SULT1A1P50225 295 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 PPT1P50897 306 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 AKR1C2P52895 323 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 CASP6P55212 293 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 BIDP55957 195 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF121P58317 390 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SNRPEP62304 92 aaKnown RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 POLR2GP62487 172 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 TLE4Q04727 773 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 AKR1C1Q04828 323 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 FABP9Q0Z7S8 132 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 KISS1Q15726 138 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 HIST3H3Q16695 136 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SOHLH1Q5JUK2 328 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 C10orf128Q5T292 105 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 HIST2H3PS2Q5TEC6 136 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 RHBDD2Q6NTF9 364 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SLC25A47Q6Q0C1 308 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 Q6ZS49 121 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 FOXL2NBQ6ZUU3 175 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SLC35E3Q7Z769 313 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF283Q8N7M2 679 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SUMF2Q8NBJ7 301 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SEMA6DQ8NFY4 1073 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 OR8B12Q8NGG6 310 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 OR51E1Q8TCB6 317 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 SLC22A8Q8TCC7 542 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 IL22RA2Q969J5 263 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 CMBLQ96DG6 245 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ARHGAP5-AS1Q96IT6 56 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 AKR1E2Q96JD6 320 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 BTF3L4Q96K17 158 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 OR10C1Q96KK4 312 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 OR11A1Q9GZK7 315 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 EIF5A2Q9GZV4 153 aaKnown RBP5.07□□□□□ -1.6
VPS33B-203ENST00000554264 TOLLIPQ9H0E2 274 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 METTL9Q9H1A3 318 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 PRDM13Q9H4Q3 707 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 PTGES2Q9H7Z7 377 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 GPR84Q9NQS5 396 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms