RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 OR5H2Q8NGV7 314 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 OR1L1Q8NH94 360 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 TRIM63Q969Q1 353 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 ARL11Q969Q4 196 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 COX4I2Q96KJ9 171 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 TAF9BQ9HBM6 251 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 MCUBQ9NWR8 336 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 TAS2R8Q9NYW2 309 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 ONECUT1Q9UBC0 465 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 LPAR3Q9UBY5 353 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 MGAT4AQ9UM21 535 aa8.08□□□□□ -1.12
CHD8-204ENST00000553622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.126e-7■■■□□ 15.2
CHD8-204ENST00000553622 IGKV1D-8A0A087WSZ0 117 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TRBV23-1A0A0A0MS06 115 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TRBV6-6A0A0A6YYG2 114 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 PPIAL4CA0A0B4J2A2 164 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 C22orf46C9J442 243 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 FAM157AC9JC47 383 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 C12orf77C9JDV5 145 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 BET1O15155 118 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 GPR37O15354 613 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 FABP7O15540 132 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 SPINT2O43291 252 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 HSPA12AO43301 675 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 FOXH1O75593 365 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 RAB3DO95716 219 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 ECDO95905 644 aaPredicted RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 SCTP09683 121 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 GSTT2P0CG29 244 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 PPIAL4GP0DN37 164 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 CCL3L1P16619 93 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 HRH1P35367 487 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TAS2R46P59540 309 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 RNASE10Q5GAN6 216 aaKnown RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 CD276Q5ZPR3 534 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 STEAP3Q658P3 488 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 FAAP20Q6NZ36 180 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TRAT1Q6PIZ9 186 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 PRSS57Q6UWY2 283 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 TMEM229BQ8NBD8 167 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 WFDC11Q8NEX6 87 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 KIRREL1Q96J84 757 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 ZNF714Q96N38 554 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 FOXC2Q99958 501 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 GINS4Q9BRT9 223 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 REG4Q9BYZ8 158 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 GAL3ST2Q9H3Q3 398 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 CALYQ9NYX4 217 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 EHFQ9NZC4 300 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 ANXA10Q9UJ72 324 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 RPUSD1Q9UJJ7 312 aaKnown RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 UBE2J1Q9Y385 318 aaPredicted RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 RBMX2Q9Y388 322 aaKnown RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 LINC00312Q9Y6C7 94 aa8.07□□□□□ -1.12
CHD8-204ENST00000553622 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
CHD8-204ENST00000553622 PDZD2O15018 2839 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 IGHV3-43A0A0B4J1X8 118 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ANKRD20A5PA0PJZ0 165 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 FAM172BPA6NC97 362 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ZNF729A6NN14 1252 aaPredicted RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 KIAA1324LA8MWY0 1029 aaPredicted RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 SDCBPO00560 298 aaPredicted RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 SMAD7O15105 426 aaKnown RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 ENSAO43768 121 aaKnown RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 HBZP02008 142 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 CD3DP04234 171 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 AMY2AP04746 511 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 IFNA6P05013 189 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 LIPFP07098 398 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 AKAIN1P0CW23 69 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ZNF728P0DKX0 622 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 IGHV3-43DP0DP04 118 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 GZMHP20718 246 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 OMGP23515 440 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 NFYBP25208 207 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ZFP36P26651 326 aaKnown RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 FAUP35544 74 aaKnown RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 RFX2P48378 723 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 DEFA1P59665 94 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 DEFA3P59666 94 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 TSPAN5P62079 268 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 PAX5Q02548 391 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 DCTN2Q13561 401 aaKnown RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 KLF9Q13886 244 aaPredicted RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 CDK10Q15131 360 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 HMGN3Q15651 99 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ACTBL2Q562R1 376 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 IGSF11Q5DX21 431 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 STEAP1BQ6NZ63 245 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ZNF880Q6PDB4 577 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 ZNF782Q6ZMW2 699 aaPredicted RBP8.06□□□□□ -1.12
CHD8-204ENST00000553622 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 KRTAP1-3Q8IUG1 177 aa8.06□□□□□ -1.12
CHD8-204ENST00000553622 LYSMD2Q8IV50 215 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms