RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 GMFBP60983 142 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TSPAN5P62079 268 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CTAG1AP78358 180 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 COL10A1Q03692 680 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 MADCAM1Q13477 382 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ASAH1Q13510 395 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 PDCD1Q15116 288 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TRIM16LQ309B1 348 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CHRFAM7AQ494W8 412 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM155Q4W5P6 130 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 LRRC10Q5BKY1 277 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 RNASE10Q5GAN6 216 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 PLAC9Q5JTB6 97 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 C6orf183Q5T699 404 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SFRP4Q6FHJ7 346 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SIGIRRQ6IA17 410 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 STEAP1BQ6NZ63 245 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF782Q6ZMW2 699 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 Q6ZS49 121 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 GDPD3Q7L5L3 318 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 MOB1BQ7L9L4 216 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF554Q86TJ5 538 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZCCHC24Q8N2G6 241 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SPICQ8N5J4 248 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ASCC1Q8N9N2 400 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 BEST4Q8NFU0 473 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 OR5H2Q8NGV7 314 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 OR4K15Q8NH41 348 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ANGPTL6Q8NI99 470 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ENKURQ8TC29 256 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SDSLQ96GA7 329 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SDHCQ99643 169 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CCL19Q99731 98 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SULT4A1Q9BR01 284 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DPAGT1Q9H3H5 408 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 PLEKHF2Q9H8W4 249 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZMAT3Q9HA38 289 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 C12orf4Q9NQ89 552 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF701Q9NV72 531 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 ING3Q9NXR8 418 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 OR6C3Q9NZP0 311 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 KAAG1Q9UBP8 84 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 KLK11Q9UBX7 282 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 LPAR3Q9UBY5 353 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 SLC23A1Q9UHI7 598 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 OPN4Q9UHM6 478 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 AK3Q9UIJ7 227 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 TRAPPC2LQ9UL33 140 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 RBMX2Q9Y388 322 aaKnown RBP4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DMRT1Q9Y5R6 373 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CACNG2Q9Y698 323 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 FAM208BQ5VWN6 2430 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 CACNA1DQ01668 2161 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DOCK11Q5JSL3 2073 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 USP24Q9UPU5 2620 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 DMXL2Q8TDJ6 3036 aa4.18□□□□□ -1.74
VTI1B-202ENST00000553619 FLNBO75369 2602 aaKnown RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 FASNP49327 2511 aaKnown RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 TANC2Q9HCD6 1990 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 TRAV24A0A0B4J272 114 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 LINC00854A0A1B0GVQ3 168 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PQ09 198 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 MEIOCA2RUB1 952 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 TRDCB7Z8K6 153 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 K7N7A8 449 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 NDUFS8O00217 210 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 WNT9BO14905 357 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 SIGLEC5O15389 551 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 SPINT2O43291 252 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PPIHO43447 177 aaKnown RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ADAM20O43506 726 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 DIRAS3O95661 229 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PTTG1O95997 202 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 DHFRP00374 187 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 GYPAP02724 150 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 MT-ND4P03905 459 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 TK1P04183 234 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 CD74P04233 296 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 FCER2P06734 321 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 HEXAP06865 529 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 DNASE1P24855 282 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 CD80P33681 288 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 CDKN1AP38936 164 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 GLP1RP43220 463 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 GPR6P46095 362 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 GZMKP49863 264 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 BTG1P62324 171 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PAX5Q02548 391 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 MEF2CQ06413 473 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 CDK10Q15131 360 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ZMYND11Q15326 602 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 C21orf62-AS1Q17RA5 79 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 SPRNQ5BIV9 151 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 RNASE12Q5GAN4 147 aaKnown RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 KRBOX4Q5JUW0 171 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 LPCAT3Q6P1A2 487 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 C11orf88Q6PI97 169 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PLET1Q6UQ28 207 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF788Q6ZQV5 615 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms