RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PTGES3LE9PB15 166 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 M0QZK8 103 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 PIN1P1O15428 100 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 ORC5O43913 435 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM106CPP0CH98 169 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 CD28P10747 220 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 MADCAM1Q13477 382 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 LTC4SQ16873 150 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 PDLIM3Q53GG5 364 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-207ENST00000553290 UTF1Q5T230 341 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 ZNF497Q6ZNH5 498 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 NDUFA11Q86Y39 141 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 MS4A15Q8N5U1 240 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 OR52M1Q8NGK5 317 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 OR5M11Q96RB7 305 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 OCSTAMPQ9BR26 566 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 UQCC2Q9BRT2 126 aa10.36□□□□□ -0.75
ACTN1-207ENST00000553290 RCC2Q9P258 522 aaKnown RBP10.36□□□□□ -0.75
ACTN1-207ENST00000553290 FAM90A9PA6NNJ1 464 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 MCRIP1C9JLW8 97 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 AIPO00170 330 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 IGHV3-7P01780 117 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 MT-ND4P03905 459 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 OPN1MWP04001 364 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 OPN1MW2P0DN77 364 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 OPN1MW3P0DN78 364 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 GNG10P50151 68 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 RAB7AP51149 207 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 ABCA11PQ4W5N1 156 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 UNQ9370/PRO34162Q6UXP9 181 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 LYPD6Q86Y78 171 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 OR8H3Q8N146 312 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 OR10X1Q8NGY0 326 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 LEAP2Q969E1 77 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 ARL11Q969Q4 196 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 RAB9BQ9NP90 201 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 GHRLQ9UBU3 117 aa10.35□□□□□ -0.75
ACTN1-207ENST00000553290 C15orf65H3BRN8 121 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CA11O75493 328 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-207ENST00000553290 GLAP06280 429 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 MGMTP16455 207 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 AQP4P55087 323 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-207ENST00000553290 GPR50Q13585 617 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 SPHARQ15513 63 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 Q3ZCU0 254 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 ACSM3Q53FZ2 586 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 HIST2H2BDQ6DRA6 164 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 RAB12Q6IQ22 244 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CENPVQ7Z7K6 275 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-207ENST00000553290 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 OR5AU1Q8NGC0 362 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CCDC107Q8WV48 283 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 NRG4Q8WWG1 115 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-207ENST00000553290 SELENOIQ9C0D9 397 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 CST11Q9H112 138 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 BANF2Q9H503 90 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 ETAA1Q9NY74 926 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 TPRKBQ9Y3C4 175 aa10.34□□□□□ -0.75
ACTN1-207ENST00000553290 A0A1W2PPI3 338 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 H0YHG0 523 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 SDCBPO00560 298 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-207ENST00000553290 SPINT2O43291 252 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 AMY1AP04745 511 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 AMY2AP04746 511 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 LPLP06858 475 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 SNRNP70P08621 437 aaKnown RBP10.33□□□□□ -0.76
ACTN1-207ENST00000553290 UBBP0CG47 229 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 FUT3P21217 361 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 SLC35A2P78381 396 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 ZNF816Q0VGE8 651 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-207ENST00000553290 MED22Q15528 200 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 C6orf183Q5T699 404 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 GLT8D1Q68CQ7 371 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 TRAT1Q6PIZ9 186 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 LYG1Q8N1E2 194 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 DRAM1Q8N682 238 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 TMEM104Q8NE00 496 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 OR56B4Q8NH76 319 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 Q96M66 194 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 OR4F4Q96R69 305 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 TMED9Q9BVK6 235 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 TRAPPC2LQ9UL33 140 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 LSM2Q9Y333 95 aaKnown RBP10.33□□□□□ -0.76
ACTN1-207ENST00000553290 MOB4Q9Y3A3 225 aa10.33□□□□□ -0.76
ACTN1-207ENST00000553290 PEX16Q9Y5Y5 336 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms