RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MAP2K4P45985 399 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 KCNJ3P48549 501 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 GNG10P50151 68 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 ACSM3Q53FZ2 586 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 C16orf82Q7Z2V1 217 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 MS4A15Q8N5U1 240 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 WIPF2Q8TF74 440 aaPredicted RBP12.7□□□□□ -0.38
CDK4-215ENST00000553237 MUL1Q969V5 352 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 RPEQ96AT9 228 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 MMP28Q9H239 520 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 LIN7BQ9HAP6 207 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 BLOC1S6Q9UL45 172 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 PSG11Q9UQ72 335 aa12.7□□□□□ -0.38
CDK4-215ENST00000553237 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 NPIPB11E5RHQ5 1161 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 G3V4G9 280 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 MAS1P04201 325 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 LPLP06858 475 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 MAPK3P27361 379 aaPredicted RBP12.69□□□□□ -0.38
CDK4-215ENST00000553237 EMX1Q04741 257 aaPredicted RBP12.69□□□□□ -0.38
CDK4-215ENST00000553237 GPR50Q13585 617 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 NHLRC3Q5JS37 347 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 LIPKQ5VXJ0 399 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 NDUFA11Q86Y39 141 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 JAGN1Q8N5M9 183 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 OR5AU1Q8NGC0 362 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 THRSPQ92748 146 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 UFD1Q92890 307 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 TOMM40LQ969M1 308 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 RBM14Q96PK6 669 aaKnown RBP12.69□□□□□ -0.38
CDK4-215ENST00000553237 Q9H521 79 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 IFT22Q9H7X7 185 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
CDK4-215ENST00000553237 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
CDK4-215ENST00000553237 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 OOSP1A8MZH6 123 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
CDK4-215ENST00000553237 ZNF780AO75290 641 aaPredicted RBP12.68□□□□□ -0.38
CDK4-215ENST00000553237 OR2F2O95006 317 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 GTF2F2P13984 249 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 PAX5Q02548 391 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 FAM27D1Q5T7N8 215 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 GLIPR1L1Q6UWM5 242 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 CENPVQ7Z7K6 275 aaPredicted RBP12.68□□□□□ -0.38
CDK4-215ENST00000553237 TMEM203Q969S6 136 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
CDK4-215ENST00000553237 MRPS28Q9Y2Q9 187 aaKnown RBP12.68□□□□□ -0.38
CDK4-215ENST00000553237 A0A1W2PRX2 142 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 AMY1AP04745 511 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 AMY2AP04746 511 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 SNRNP70P08621 437 aaKnown RBP12.67□□□□□ -0.38
CDK4-215ENST00000553237 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 GZMHP20718 246 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 GP2P55259 537 aaKnown RBP12.67□□□□□ -0.38
CDK4-215ENST00000553237 TPBGQ13641 420 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 FAM53AQ6NSI3 398 aaPredicted RBP12.67□□□□□ -0.38
CDK4-215ENST00000553237 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 LINC00596Q86U02 117 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 DRAM1Q8N682 238 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 OR56B4Q8NH76 319 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 MGLLQ99685 303 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 ISYNA1Q9NPH2 558 aa12.67□□□□□ -0.38
CDK4-215ENST00000553237 TGP01266 2768 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 MT-ND4P03905 459 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 MLLT11Q13015 90 aaPredicted RBP12.66□□□□□ -0.38
CDK4-215ENST00000553237 MADCAM1Q13477 382 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 GPR176Q14439 515 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 HES1Q14469 280 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 HNF4GQ14541 408 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 TBCEQ15813 527 aaPredicted RBP12.66□□□□□ -0.38
CDK4-215ENST00000553237 AWAT2Q6E213 333 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 CDH26Q8IXH8 852 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 OR10X1Q8NGY0 326 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 BANF2Q9H503 90 aa12.66□□□□□ -0.38
CDK4-215ENST00000553237 NOTCH3Q9UM47 2321 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 SC5DO75845 299 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms