RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 LINC00311Q8N616 119 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 OR8H1Q8NGG4 311 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 FGGYQ96C11 551 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 NR1H4Q96RI1 486 aaPredicted RBP9.87□□□□□ -0.83
VPS29-211ENST00000553128 CHCHD6Q9BRQ6 235 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 THAP7Q9BT49 309 aaPredicted RBP9.87□□□□□ -0.83
VPS29-211ENST00000553128 ADI1Q9BV57 179 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 KRT84Q9NSB2 600 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 STUB1Q9UNE7 303 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 FBXO7Q9Y3I1 522 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
VPS29-211ENST00000553128 KRT8P05787 483 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 FSTP19883 344 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 PRKACBP22694 351 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 MMDQ15546 238 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 C19orf54Q5BKX5 351 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 RNLSQ5VYX0 342 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 UTS2BQ765I0 119 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 ANKRD13BQ86YJ7 626 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 DEFB107AQ8IZN7 70 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 OR10A7Q8NGE5 316 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 OR10AC1Q8NH08 325 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 CNIH3Q8TBE1 160 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 SPSB1Q96BD6 273 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 C10orf35Q96D05 121 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 MBOAT4Q96T53 435 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 BARHL1Q9BZE3 327 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 NCOR1P1Q9H4R4 102 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 NEK6Q9HC98 313 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 PKHD1P08F94 4074 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 FAT2Q9NYQ8 4349 aa9.86□□□□□ -0.83
VPS29-211ENST00000553128 A0A1W2PN81 502 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 A0A1W2PQL4 384 aaPredicted RBP9.85□□□□□ -0.83
VPS29-211ENST00000553128 C15orf65H3BRN8 121 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 APOL3O95236 402 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 CST1P01037 141 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 CHRNA7P36544 502 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 MS4A2Q01362 244 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 ECSCRQ19T08 205 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 AADACL4Q5VUY2 407 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 LINC00322Q6ZN03 302 aaPredicted RBP9.85□□□□□ -0.83
VPS29-211ENST00000553128 SATL1Q86VE3 508 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 CCDC54Q8NEL0 328 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 OR13C9Q8NGT0 318 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 ANKRD60Q9BZ19 345 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 MRPS28Q9Y2Q9 187 aaKnown RBP9.85□□□□□ -0.83
VPS29-211ENST00000553128 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
VPS29-211ENST00000553128 METTL15A6NJ78 407 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 SDCBPO00560 298 aaPredicted RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 HLA-DRB1P01911 266 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 HSPB1P04792 205 aaKnown RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 ZNF134P52741 427 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 PIGYQ3MUY2 71 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 FAM98BQ52LJ0 330 aaKnown RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 SAXO1Q8IYX7 474 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 OR51A4Q8NGJ6 313 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 ARL8BQ9NVJ2 186 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 CHCHD3Q9NX63 227 aaKnown RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 GFOD1Q9NXC2 390 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 CEPT1Q9Y6K0 416 aa9.84□□□□□ -0.83
VPS29-211ENST00000553128 DYNC1H1Q14204 4646 aaKnown RBP9.84□□□□□ -0.83
VPS29-211ENST00000553128 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 DEDDO75618 318 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 UBCP0CG48 685 aaKnown RBP9.83□□□□□ -0.84
VPS29-211ENST00000553128 TMEM225BP0DP42 221 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ZNF20P17024 532 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 CRISP1P54107 249 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ACTBP60709 375 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 EFNB1P98172 346 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 PAX5Q02548 391 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 LSAMPQ13449 338 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 GK3PQ14409 553 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ZSCAN26Q16670 478 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 SLC25A48Q6ZT89 311 aaKnown RBP9.83□□□□□ -0.84
VPS29-211ENST00000553128 C8orf31Q8N9H6 132 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ZNF439Q8NDP4 499 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 GATAD1Q8WUU5 269 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 MS4A10Q96PG2 267 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ST6GALNAC5Q9BVH7 336 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ELOVL1Q9BW60 279 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 ZNF556Q9HAH1 456 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 PLEKHA3Q9HB20 300 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 RHOFQ9HBH0 211 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 A3GALT2U3KPV4 340 aa9.83□□□□□ -0.84
VPS29-211ENST00000553128 RGS11O94810 467 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 MT-ND2P03891 347 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 OCM2P0CE71 109 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 OCMP0CE72 109 aaPredicted RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 RAP2AP10114 183 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 EGR2P11161 476 aaPredicted RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 IL3RAP26951 378 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 ZNF137PP52743 207 aa9.82□□□□□ -0.84
VPS29-211ENST00000553128 NANOS3P60323 173 aaKnown RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 PTGES3Q15185 160 aaKnown RBP9.82□□□□□ -0.84
VPS29-211ENST00000553128 LRRC36Q1X8D7 754 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms