RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 FAM209AQ5JX71 171 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 VAX1Q5SQQ9 334 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 RNF144BQ7Z419 303 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 POC1AQ8NBT0 407 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 BEST4Q8NFU0 473 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 OR2Z1Q8NG97 314 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 OR11L1Q8NGX0 322 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 ST8SIA4Q92187 359 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 ELMOD3Q96FG2 381 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 MED30Q96HR3 178 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 ST6GALNAC5Q9BVH7 336 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 EGLN1Q9GZT9 426 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 MED28Q9H204 178 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 C12orf4Q9NQ89 552 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 CA10Q9NS85 328 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 NUDT15Q9NV35 164 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 ING3Q9NXR8 418 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 SLC2A8Q9NY64 477 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 TAAR3PQ9P1P4 343 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 ANAPC10Q9UM13 185 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 DYSFO75923 2080 aa5.95□□□□□ -1.46
DEPDC4-208ENST00000549341 IGLV3-9A0A075B6K5 115 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 IGKV1-12A0A0C4DH73 117 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KIR2DS1A0A191URI9 304 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 FOXI3A8MTJ6 420 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SNRPGP15A8MWD9 76 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 IFNL4K9M1U5 179 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CDIPTO14735 213 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SYNGR1O43759 233 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CREBL2O60519 120 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CCNKO75909 580 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KNG1P01042 644 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 IGKV1D-12P01611 117 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 RLN1P04808 185 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 PGA5P0DJD9 388 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 ZNF44P15621 663 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 TNFRSF1AP19438 455 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 GLRA1P23415 457 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 GLP1RP43220 463 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KIR2DS4P43632 304 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 NPBWR2P48146 333 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KCNJ3P48549 501 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CCR6P51684 374 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 DVL1P1P54792 670 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SNU13P55769 128 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 ZNF154Q13106 437 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KIR2DS1Q14954 304 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CDK10Q15131 360 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SRSF7Q16629 238 aaKnown RBP eCLIP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SMIM21Q3B7S5 101 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 PIGYQ3MUY2 71 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CRIP3Q6Q6R5 217 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 IDO2Q6ZQW0 420 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 MOB1BQ7L9L4 216 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 C6orf201Q7Z4U5 140 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 FAM90A1Q86YD7 464 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CADM3Q8N126 398 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 ZDHHC22Q8N966 263 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SCCPDHQ8NBX0 429 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 OR10AD1Q8NGE0 317 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 OR5AP2Q8NGF4 316 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 OR51S1Q8NGJ8 323 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 GTF3AQ92664 365 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 DVL3Q92997 716 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 UPRTQ96BW1 309 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 JMJD8Q96S16 334 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 SLC6A7Q99884 636 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 FAAP24Q9BTP7 215 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 PPA2Q9H2U2 334 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 HEATR1Q9H583 2144 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 IFT22Q9H7X7 185 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 MYOZ1Q9NP98 299 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 NECAP2Q9NVZ3 263 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 HIF1ANQ9NWT6 349 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 ETAA1Q9NY74 926 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 TREM2Q9NZC2 230 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 MTCH1Q9NZJ7 389 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 FZR1Q9UM11 496 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 KCNK7Q9Y2U2 307 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 ALG5Q9Y673 324 aa5.94□□□□□ -1.46
DEPDC4-208ENST00000549341 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 LOC105371242A0A075B767 164 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 A0A1B0GWJ7 208 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 TMEM82A0PJX8 343 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 LRRC30A6NM36 301 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 F5H5P2 479 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 M0QYG6 137 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 ARPC1BO15143 372 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 SPRY3O43610 288 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 SSNA1O43805 119 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 SSX5O60225 188 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 PMP2P02689 132 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 CSN2P05814 226 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 DAOP14920 347 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 S100GP29377 79 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 APOBEC3AP31941 199 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 BTCP35070 178 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 HRH1P35367 487 aa5.93□□□□□ -1.46
DEPDC4-208ENST00000549341 UBE2MP61081 183 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms