RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TRAV34A0A0B4J273 112 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 A0A1B0GTQ1 180 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 A0A1W2PR80 420 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 MEX3AA1L020 520 aaKnown RBP10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 DNPH1O43598 174 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 TRGC2P03986 189 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 PGA4P0DJD7 388 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 OR10J1P30954 320 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 RAB7AP51149 207 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 SERF2P84101 59 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 FAM27BQ5VT28 67 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 POC1AQ8NBT0 407 aa10.66□□□□□ -0.7
NPC1L1-204ENST00000546276 CBY3A6NI87 242 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 PDE6DO43924 150 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 CCL3P10147 92 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 HOXA6P31267 233 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 PAX5Q02548 391 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 TFF2Q03403 129 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 BTNL3Q6UXE8 466 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 R3HDM4Q96D70 268 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 TMEM222Q9H0R3 208 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 TMEM14DPA8MWL7 114 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 MS4A18H0YCH9 400 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 MS4A18Q3C1V0 323 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 COX19Q49B96 90 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 C16orf82Q7Z2V1 217 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 MSL2Q9HCI7 577 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 J3QT63 122 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 PRF1P14222 555 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 LIFP15018 202 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 ID4P47928 161 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 FAM3BP58499 235 aaPredicted RBP10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 ACSM6Q6P461 480 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 SLC25A47Q6Q0C1 308 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 TIPARPQ7Z3E1 657 aaKnown RBP10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 LYG1Q8N1E2 194 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 OR5A2Q8NGI9 324 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 A0A0G2JMZ2 1700 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.7
NPC1L1-204ENST00000546276 ACAA1P09110 424 aaPredicted RBP10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 KLK2P20151 261 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 EGR4Q05215 589 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 LINC00596Q86U02 117 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 OR2I1PQ8NGU4 316 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 OR2Y1Q8NGV0 311 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 ADIPOR1Q96A54 375 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM56Q96MV1 263 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 TUBD1Q9UJT1 453 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 LHFPL6Q9Y693 200 aa10.65□□□□□ -0.71
NPC1L1-204ENST00000546276 DANCRP0C864 163 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 SPINK2P20155 84 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 SLC22A18ASQ8N1D0 253 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 EIF4E3Q8N5X7 224 aaKnown RBP10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 CA11O75493 328 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 TBX6O95947 436 aaPredicted RBP10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 LGALS4P56470 323 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 SSPNQ14714 243 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 ATRAIDQ6UW56 229 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 ATP23Q9Y6H3 246 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 SCN10AQ9Y5Y9 1956 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 LOC102723971A0A1B0GUV8 181 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 OOEPA6NGQ2 149 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 SPRY3O43610 288 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 F2RP25116 425 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 MEOX1P50221 254 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 IGLV3-21P80748 117 aaPredicted RBP10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 MOB3AQ96BX8 217 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 AICDAQ9GZX7 198 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 ZNF253O75346 499 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 TNFSF15O95150 251 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM11P17152 192 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 MDKP21741 143 aaPredicted RBP10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 OR5AU1Q8NGC0 362 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 TIMM9Q9Y5J7 89 aa10.64□□□□□ -0.71
NPC1L1-204ENST00000546276 H0YL77 283 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 DNASE2O00115 360 aaPredicted RBP10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 SLC31A2O15432 143 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 EIF3IQ13347 325 aaKnown RBP10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 STUMQ69YW2 141 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 Q6ZN92 141 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 SCARF2Q96GP6 870 aaPredicted RBP10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 BET1LQ9NYM9 111 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 LCTP09848 1927 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 H0Y980 276 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 GAS1P54826 345 aa10.63□□□□□ -0.71
NPC1L1-204ENST00000546276 APCDD1LQ8NCL9 501 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms