RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 OR8U9P0C7N5 309 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 C12orf73Q69YU5 71 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 TCEANCQ8N8B7 351 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 OR2G2Q8NGZ5 317 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 TOLLIPQ9H0E2 274 aa11.33□□□□□ -0.6
RTN3-214ENST00000545432 ZNF107Q9UII5 783 aaPredicted RBP11.33□□□□□ -0.6
RTN3-214ENST00000545432 ZAR1LA6NP61 321 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 G3V318 75 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 GNGT2O14610 69 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 HSPA12AO43301 675 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 TXNL1O43396 289 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 IGLV1-51P01701 117 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 DAPP51397 102 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 CRIP2P52943 208 aaPredicted RBP11.32□□□□□ -0.6
RTN3-214ENST00000545432 HAGHQ16775 308 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 LTC4SQ16873 150 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 PAN3Q58A45 887 aaKnown RBP11.32□□□□□ -0.6
RTN3-214ENST00000545432 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 GID4Q8IVV7 300 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 PXT1Q8NFP0 134 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 OR5D18Q8NGL1 313 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 PRRG3Q9BZD7 231 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 ZCCHC4Q9H5U6 513 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 FRRS1LQ9P0K9 344 aa11.32□□□□□ -0.6
RTN3-214ENST00000545432 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 AQP12BA6NM10 295 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 M0R129 80 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 CCR9P51686 369 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 SLURP1P55000 103 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 ZNF85Q03923 595 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 GABPB1Q06547 395 aaPredicted RBP11.31□□□□□ -0.6
RTN3-214ENST00000545432 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTN3-214ENST00000545432 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
RTN3-214ENST00000545432 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 ZNF439Q8NDP4 499 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 OR5B12Q96R08 314 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 TBX5Q99593 518 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 ALX4Q9H161 411 aaPredicted RBP11.31□□□□□ -0.6
RTN3-214ENST00000545432 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
RTN3-214ENST00000545432 WSB1Q9Y6I7 421 aa11.31□□□□□ -0.6
RTN3-214ENST00000545432 B2RBV5 119 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 ARPC1BO15143 372 aaKnown RBP11.3□□□□□ -0.6
RTN3-214ENST00000545432 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 ORC5O43913 435 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
RTN3-214ENST00000545432 ZNF20P17024 532 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 IL3RAP26951 378 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 EPHA2P29317 976 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
RTN3-214ENST00000545432 KISS1Q15726 138 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 STEAP3Q658P3 488 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
RTN3-214ENST00000545432 KCTD20Q7Z5Y7 419 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 SGPP2Q8IWX5 399 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 OR13C9Q8NGT0 318 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 OR10AC1Q8NH08 325 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
RTN3-214ENST00000545432 KMT2AQ03164 3969 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 IGHV4OR15-8A0A075B7B6 117 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 A0A087WW49 117 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 HSPB6O14558 160 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 SOX15O60248 233 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 IFNA6P05013 189 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 TMEM225BP0DP42 221 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 ZNF134P52741 427 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 TMED1Q13445 227 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 UTP4Q969X6 686 aaKnown RBP11.29□□□□□ -0.6
RTN3-214ENST00000545432 EME1Q96AY2 570 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
RTN3-214ENST00000545432 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
RTN3-214ENST00000545432 NEK6Q9HC98 313 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 FAM118AQ9NWS6 357 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
RTN3-214ENST00000545432 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 SLC31A2O15432 143 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 LANCL1O43813 399 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 LSAMPQ13449 338 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 ZNF691Q5VV52 312 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 ZNF529Q6P280 563 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
RTN3-214ENST00000545432 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
RTN3-214ENST00000545432 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms