RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MPV17LQ2QL34 196 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 FAM74A3Q4VXF1 159 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 VHLLQ6RSH7 139 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 LYZL2Q7Z4W2 148 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 SLC35G3Q8N808 338 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 OR10AD1Q8NGE0 317 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 DDA1Q9BW61 102 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 MRPL13Q9BYD1 178 aaKnown RBP5.03□□□□□ -1.6
VPS50-220ENST00000544910 HSF4Q9ULV5 492 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 ATG2BQ96BY7 2078 aa5.03□□□□□ -1.6
VPS50-220ENST00000544910 A0A1B0GTI1 187 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 AQP7O14520 342 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 RRP8O43159 456 aaKnown RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 RAMP1O60894 148 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 WDR1O75083 606 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FBP1P09467 338 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF735P0CB33 412 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 DYNLT3P51808 116 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 NUFIP2Q7Z417 695 aaKnown RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 GAPTQ8N292 157 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 OR5C1Q8NGR4 320 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 SARAFQ96BY9 339 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 RAB40CQ96S21 281 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM234AQ9H0X4 552 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF552Q9H707 407 aaPredicted RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 PRRC2BQ5JSZ5 2229 aaKnown RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 IGHV3-64DA0A0J9YX35 117 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 M0R1X1 148 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 SLC31A2O15432 143 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 PITX3O75364 302 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 OR10J4P0C629 311 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CCL1P22362 96 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 DDTP30046 118 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CEACAM6P40199 344 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 GPR12P47775 334 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 EWSR1Q01844 656 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS50-220ENST00000544910 C3AR1Q16581 482 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 STUMQ69YW2 141 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 POC1AQ8NBT0 407 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CA5BP1Q8WTZ4 195 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ATP5SQ99766 215 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 KLHDC3Q9BQ90 382 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ERRFI1Q9UJM3 462 aaPredicted RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 NKX6-3A6NJ46 265 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CST7O76096 145 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF816Q0VGE8 651 aaPredicted RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 SMIM21Q3B7S5 101 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF600Q6ZNG1 722 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ADAMTS17Q8TE56 1095 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ERGIC1Q969X5 290 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 IL17BQ9UHF5 180 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM74A7A6NL05 159 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 M0R1B8 84 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 SRSF10O75494 262 aaKnown RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF205O95201 554 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CFPP27918 469 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 TMEM50BP56557 158 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 SIGLEC14Q08ET2 396 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 PRR27Q6MZM9 219 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 MRPL14Q6P1L8 145 aaKnown RBP5.02□□□□□ -1.61
VPS50-220ENST00000544910 OR2T10Q8NGZ9 312 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ABHD5Q8WTS1 349 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 HEXA-AS1Q9H8Q6 139 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 GLRX2Q9NS18 164 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 UBE2L5PA0A1B0GUS4 154 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 A0A1W2PR80 420 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 MAP1LC3B2A6NCE7 125 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 NKX2-6A6NCS4 301 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A20PA6NIJ5 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A8PA6NJQ4 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A7PA6NKC0 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A22PA8MWA6 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A12PA8MX19 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A23PA8MXZ1 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 TCF21O43680 179 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 HRASP01112 189 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 KRASP01116 189 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A13PP0C7W8 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FAM90A24PP0C7X0 464 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 PMCHP20382 165 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 EDDM3BP56851 147 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 OR5I1Q13606 314 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 CEACAM21Q3KPI0 293 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 STPG1Q5TH74 334 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ASPHD2Q6ICH7 369 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 REC114Q7Z4M0 266 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 ZNF738Q8NE65 137 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 OR5A2Q8NGI9 324 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 MAP1LC3BQ9GZQ8 125 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 WNT5BQ9H1J7 359 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 FBLN5Q9UBX5 448 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
VPS50-220ENST00000544910 MASP2O00187 686 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SYNGR3O43761 229 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms