RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SDC1P18827 310 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 P2RY1P47900 373 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 SULT1A2P50226 295 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 DHRS2Q13268 280 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 C1orf195Q5TG92 126 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 MRPL14Q6P1L8 145 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ANKRD16Q6P6B7 361 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 CBLN3Q6UW01 205 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 NR2C2APQ86WQ0 139 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 OR4K17Q8NGC6 315 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 STAG3L4Q8TBR4 150 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 IRF7Q92985 503 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 EID2BQ96D98 161 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 MYADMQ96S97 322 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 GPER1Q99527 375 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 NRTNQ99748 197 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 POLR2J2Q9GZM3 115 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 FLVCR1Q9Y5Y0 555 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 DYSFO75923 2080 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 PYCARD-AS1I3L0S3 204 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 HLA-AP01891 365 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 PRH1P02810 166 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 CRYGBP07316 175 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 PVRP15151 417 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 NKX2-1P43699 371 aaPredicted RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ADORA2A-AS1P86434 159 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 UPP1Q16831 310 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF385BQ569K4 471 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 TMEM173Q86WV6 379 aaPredicted RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 SOCS4Q8WXH5 440 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 GLYATL1Q969I3 302 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 BEX4Q9NWD9 120 aaPredicted RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ANKRD10Q9NXR5 420 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 CISD1Q9NZ45 108 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 A0A1W2PPI3 338 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ZBTB42B2RXF5 422 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 NUDT3O95989 172 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 MRPL3P09001 348 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 BCL2L1Q07817 233 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 EXOSC7Q15024 291 aaKnown RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 VWA2Q5GFL6 755 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 FAM71E1Q6IPT2 247 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 C11orf87Q6NUJ2 197 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 BTNL8Q6UX41 500 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 DTX2Q86UW9 622 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 SIAH3Q8IW03 269 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 KRTCAP2Q8N6L1 136 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 OR1J2Q8NGS2 313 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 ZG16BQ96DA0 208 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 RARRES2Q99969 163 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 NOX4Q9NPH5 578 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 PDE4DIPQ5VU43 2346 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 RPL36A-HNRNPH2H7BZ11 118 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 GABRPO00591 440 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 ISLRO14498 428 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 TBL1XO60907 577 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 GNB3P16520 340 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 HGFACQ04756 655 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 OR4K1Q8NGD4 311 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 SLC25A43Q8WUT9 341 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 RASL11BQ9BPW5 248 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 IL21Q9HBE4 155 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 NPVFQ9HCQ7 196 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 SZT2Q5T011 3432 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 POLR2AP24928 1970 aaKnown RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 PRKNO60260 465 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 TAL2Q16559 108 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 TMEM69Q5SWH9 247 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 SCD5Q86SK9 330 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 DEFB106AQ8N104 65 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 OR4C13Q8NGP0 309 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 DEFB118Q96PH6 123 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF703Q9H7S9 590 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 LRTM1Q9HBL6 345 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF860A6NHJ4 632 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 FAM166BA8MTA8 275 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 TNFRSF11BO00300 401 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 PNPLA4P41247 253 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 LCN6P62502 163 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 KLF9Q13886 244 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 EFNB3Q15768 340 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 VWC2Q2TAL6 325 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 UBE2NLQ5JXB2 153 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 SLC36A1Q7Z2H8 476 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 D2HGDHQ8N465 521 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 ATG10Q9H0Y0 220 aa7.69□□□□□ -1.18
VPS13D-212ENST00000543766 SLC25A10Q9UBX3 287 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-212ENST00000543766 C9JAW5 83 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 FGF16O43320 207 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF74Q16587 644 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 LCN15Q6UWW0 184 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 ANKRD33Q7Z3H0 272 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 OOSP2Q86WS3 158 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 TEX45Q8NA69 505 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms