RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 WI2-2373I1.2A0A1W2PRP0 233 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
CSF1R-209ENST00000543093 H0YHG0 523 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 TOR1AO14656 332 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 GEMIN2O14893 280 aaKnown RBP12.35□□□□□ -0.43
CSF1R-209ENST00000543093 GTF2F2P13984 249 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 MYF6P23409 242 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 NFYBP25208 207 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 CD34P28906 385 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 GDNFP39905 211 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 KRTAP10-11P60412 298 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 MED22Q15528 200 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 C17orf58Q2M2W7 97 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 C10orf99Q6UWK7 81 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 OR13A1Q8NGR1 328 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 PLPPR1Q8TBJ4 325 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 RCC1LQ96I51 464 aaKnown RBP12.35□□□□□ -0.43
CSF1R-209ENST00000543093 ANKRD60Q9BZ19 345 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSF1R-209ENST00000543093 CALYQ9NYX4 217 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 TPRKBQ9Y3C4 175 aa12.35□□□□□ -0.43
CSF1R-209ENST00000543093 NBEAL2Q6ZNJ1 2754 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 A0A087X0M5 115 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 A0A1B0GX30 115 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 A0A1W2PP11 408 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 OR2F2O95006 317 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 IL1AP01583 271 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 HSPA13P48723 471 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 IZUMO2Q6UXV1 221 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 CREB3L1Q96BA8 519 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 KIRREL1Q96J84 757 aa12.34□□□□□ -0.43
CSF1R-209ENST00000543093 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
CSF1R-209ENST00000543093 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
CSF1R-209ENST00000543093 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.44
CSF1R-209ENST00000543093 IGLV1-47P01700 117 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
CSF1R-209ENST00000543093 CEACAM3P40198 252 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 PRRX1P54821 245 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
CSF1R-209ENST00000543093 SPHARQ15513 63 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 C9orf152Q5JTZ5 239 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 NEK7Q8TDX7 302 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 UFD1Q92890 307 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.44
CSF1R-209ENST00000543093 TMED9Q9BVK6 235 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 ZNF581Q9P0T4 197 aa12.33□□□□□ -0.44
CSF1R-209ENST00000543093 AMMECR1Q9Y4X0 333 aaPredicted RBP12.33□□□□□ -0.44
CSF1R-209ENST00000543093 RGS10O43665 173 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 AMY1AP04745 511 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 AMY2AP04746 511 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 CGB3P0DN86 165 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 CGB7P0DN87 165 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 SSTR5P35346 364 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 IRF3Q14653 427 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
CSF1R-209ENST00000543093 TPTE2P1Q5T6R2 138 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 OR9G1Q8NH87 305 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 UQCC2Q9BRT2 126 aa12.32□□□□□ -0.44
CSF1R-209ENST00000543093 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
CSF1R-209ENST00000543093 MGMTP16455 207 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 GPR50Q13585 617 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 INSL4Q14641 139 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 LTC4SQ16873 150 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 ACSM3Q53FZ2 586 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 CCDC144NLQ6NUI1 221 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 OR10A7Q8NGE5 316 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 LINC00574Q9H8X3 128 aa12.31□□□□□ -0.44
CSF1R-209ENST00000543093 RCC2Q9P258 522 aaKnown RBP12.31□□□□□ -0.44
CSF1R-209ENST00000543093 COL7A1Q02388 2944 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 MCRIP1C9JLW8 97 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 AIPO00170 330 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
CSF1R-209ENST00000543093 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms