RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 CNRIP1Q96F85 164 aaPredicted RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 PPP1R16AQ96I34 528 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 HPDLQ96IR7 371 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 BTF3L4Q96K17 158 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 PGLYRP3Q96LB9 341 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 JSRP1Q96MG2 331 aaPredicted RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 CHST6Q9GZX3 395 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 ZBP1Q9H171 429 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 RPF1Q9H9Y2 349 aaKnown RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 TAF9BQ9HBM6 251 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 CLEC5AQ9NY25 188 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 VPS29Q9UBQ0 182 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 ZNF230Q9UIE0 474 aaPredicted RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 KCNK6Q9Y257 313 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 NTNG1Q9Y2I2 539 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 MEMO1Q9Y316 297 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 MRPS2Q9Y399 296 aaKnown RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 MRPS16Q9Y3D3 137 aaKnown RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 OARD1Q9Y530 152 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 MRPS18BQ9Y676 258 aaKnown RBP3.29□□□□□ -1.88
MDM2-229ENST00000543046 SHROOM3Q8TF72 1996 aa3.29□□□□□ -1.88
MDM2-229ENST00000543046 ROBO1Q9Y6N7 1651 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 IGHV2OR16-5A0A0B4J2B6 119 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR51F1A6NGY5 319 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 YJEFN3A6XGL0 299 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 NPIPA7E9PJI5 369 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 H3BQ15 152 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CLDN34H7C241 214 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CORTO00230 105 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 YPEL1O60688 119 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 LRP3O75074 770 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 NME6O75414 186 aaPredicted RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 VAMP5O95183 116 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 PDYNP01213 254 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 HSPB1P04792 205 aaKnown RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 PCCBP05166 539 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 FGF1P05230 155 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 ZNF735P0CB33 412 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 PET100P0DJ07 73 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 NPIPA8P0DM63 369 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR13C7P0DN81 318 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CD37P11049 281 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CD59P13987 128 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 KCNE1P15382 129 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 ACP1P24666 158 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 PRSS3P35030 304 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CEACAM3P40198 252 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 AQP2P41181 271 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 TNFSF9P41273 254 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 LGALS7P47929 136 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 LIM2P55344 173 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 BIDP55957 195 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR1D5P58170 312 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 TAS2R31P59538 309 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CSNK1G2P78368 415 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 HMGCS1Q01581 520 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 IRF8Q02556 426 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 FOXF1Q12946 379 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 IL15RAQ13261 267 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 INSL4Q14641 139 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CDK5R1Q15078 307 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 DUSP5Q16690 384 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 ACOT6Q3I5F7 207 aaPredicted RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 BEX5Q5H9J7 111 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 TMEM225Q6GV28 225 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 REEP3Q6NUK4 255 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SBSNQ6UWP8 590 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CLEC18BQ6UXF7 455 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 Q6ZRG5 221 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 TMPPEQ6ZT21 453 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SMIM5Q71RC9 77 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 MEX3DQ86XN8 651 aaKnown RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 DND1Q8IYX4 353 aaKnown RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 ZNF101Q8IZC7 436 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SYS1Q8N2H4 156 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 NPWQ8N729 165 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SUMF2Q8NBJ7 301 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CLEC1AQ8NC01 280 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 MORN4Q8NDC4 146 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR4C5Q8NGB2 326 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR10W1Q8NGF6 305 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR51A2Q8NGJ7 313 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR1L6Q8NGR2 347 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SYNPRQ8TBG9 265 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 LGALS14Q8TCE9 139 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 RPS4Y2Q8TD47 263 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 CXorf40AQ8TE69 158 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 SEH1LQ96EE3 360 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 YPEL2Q96QA6 119 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 RASL10BQ96S79 203 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 KLHDC3Q9BQ90 382 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 GINS3Q9BRX5 216 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 OR51I1Q9H343 314 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 TCEAL2Q9H3H9 227 aaPredicted RBP3.28□□□□□ -1.88
MDM2-229ENST00000543046 WFDC1Q9HC57 220 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 RAB18Q9NP72 206 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 ZNF302Q9NR11 478 aa3.28□□□□□ -1.88
MDM2-229ENST00000543046 PHPT1Q9NRX4 125 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms