RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM90A18PA6NE21 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A16PA6NEW6 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A20PA6NIJ5 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A7PA6NKC0 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A12PA8MX19 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A5PA8MXJ8 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A23PA8MXZ1 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 MCRIP1C9JLW8 97 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 ORC5O43913 435 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A15PP0C7V4 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A13PP0C7W8 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A14PP0C7W9 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 FAM90A24PP0C7X0 464 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 RAB7AP51149 207 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 AQP4P55087 323 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.17
LTBR-210ENST00000542830 GABPB1Q06547 395 aaPredicted RBP13.96□□□□□ -0.17
LTBR-210ENST00000542830 SPHARQ15513 63 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 UTF1Q5T230 341 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 ZNF497Q6ZNH5 498 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 Q6ZS46 218 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 LYPD6Q86Y78 171 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 OR10X1Q8NGY0 326 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 WIPF2Q8TF74 440 aaPredicted RBP13.96□□□□□ -0.17
LTBR-210ENST00000542830 LEAP2Q969E1 77 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 OCSTAMPQ9BR26 566 aa13.96□□□□□ -0.17
LTBR-210ENST00000542830 TRAV39A0A0B4J263 110 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 FAM90A9PA6NNJ1 464 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 AIPO00170 330 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 CA11O75493 328 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 IGHV3-7P01780 117 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 MT-ND4P03905 459 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 GNG10P50151 68 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 ACSM3Q53FZ2 586 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 UNQ9370/PRO34162Q6UXP9 181 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 NDUFA11Q86Y39 141 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 OR8H3Q8N146 312 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 ARL11Q969Q4 196 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 OR5M11Q96RB7 305 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 SELENOIQ9C0D9 397 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 VCX3BQ9H321 246 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 ETAA1Q9NY74 926 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
LTBR-210ENST00000542830 H0YHG0 523 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 C15orf65H3BRN8 121 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 CRTAPO75718 401 aaPredicted RBP13.94□□□□□ -0.18
LTBR-210ENST00000542830 OPN1MWP04001 364 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 GLAP06280 429 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 UBBP0CG47 229 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 OPN1MW2P0DN77 364 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 OPN1MW3P0DN78 364 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 CD28P10747 220 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 MGMTP16455 207 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 SLC35A2P78381 396 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 GPR50Q13585 617 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 TMEM30BQ3MIR4 351 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 Q3ZCU0 254 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 ABCA11PQ4W5N1 156 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 PDLIM3Q53GG5 364 aaPredicted RBP13.94□□□□□ -0.18
LTBR-210ENST00000542830 C6orf183Q5T699 404 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 GLT8D1Q68CQ7 371 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 RAB12Q6IQ22 244 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 TRAT1Q6PIZ9 186 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 CCDC107Q8WV48 283 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 NRG4Q8WWG1 115 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 PHYHIPQ92561 330 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 CST11Q9H112 138 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 BANF2Q9H503 90 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 LSM2Q9Y333 95 aaKnown RBP13.94□□□□□ -0.18
LTBR-210ENST00000542830 PEX16Q9Y5Y5 336 aa13.94□□□□□ -0.18
LTBR-210ENST00000542830 NOTCH1P46531 2555 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 A0A1W2PPI3 338 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 SDCBPO00560 298 aaPredicted RBP13.93□□□□□ -0.18
LTBR-210ENST00000542830 MYF6P23409 242 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 MED22Q15528 200 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 TMEM95Q3KNT9 176 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 C8orf31Q8N9H6 132 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 OR56B4Q8NH76 319 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 UFD1Q92890 307 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 Q96M66 194 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 TMED9Q9BVK6 235 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 GFOD1Q9NXC2 390 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 MOB4Q9Y3A3 225 aa13.93□□□□□ -0.18
LTBR-210ENST00000542830 SPINT2O43291 252 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 LPLP06858 475 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 SNRNP70P08621 437 aaKnown RBP13.92□□□□□ -0.18
LTBR-210ENST00000542830 FUT3P21217 361 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 IL3RAP26951 378 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 ZNF816Q0VGE8 651 aaPredicted RBP13.92□□□□□ -0.18
LTBR-210ENST00000542830 IRF3Q14653 427 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 RBM48Q5RL73 367 aaKnown RBP13.92□□□□□ -0.18
LTBR-210ENST00000542830 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
LTBR-210ENST00000542830 HIST2H2BDQ6DRA6 164 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 CENPVQ7Z7K6 275 aaPredicted RBP13.92□□□□□ -0.18
LTBR-210ENST00000542830 GAPTQ8N292 157 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
LTBR-210ENST00000542830 TMEM104Q8NE00 496 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms