RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OR10C1Q96KK4 312 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 NGBQ9NPG2 151 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 KIF25Q9UIL4 384 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 IFNL4K9M1U5 179 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 HSD17B6O14756 317 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 SFTPCP11686 197 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 C4BPBP20851 252 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 CFHR2P36980 270 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 KCNJ3P48549 501 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 H1FOOQ8IZA3 346 aaPredicted RBP18.84■□□□□ 0.61
HOMER3-204ENST00000539827 CCDC71LQ8N9Z2 235 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 LINC01560Q8TB33 94 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 COQ2Q96H96 371 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 TAF9BQ9HBM6 251 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 CCL28Q9NRJ3 127 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 MBNL3Q9NUK0 354 aaKnown RBP18.84■□□□□ 0.61
HOMER3-204ENST00000539827 POLEQ07864 2286 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 ICE1Q9Y2F5 2266 aa18.84■□□□□ 0.61
HOMER3-204ENST00000539827 POM121CA8CG34 1229 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 GRNP28799 593 aaKnown RBP18.83■□□□□ 0.61
HOMER3-204ENST00000539827 GABRA2P47869 451 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 FAM201AQ5SY85 155 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 SLC35E4Q6ICL7 350 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 C11orf87Q6NUJ2 197 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 ZNF818PQ6ZRF7 136 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 COQ3Q9NZJ6 369 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 IL19Q9UHD0 177 aa18.83■□□□□ 0.61
HOMER3-204ENST00000539827 TPRP12270 2363 aaKnown RBP18.83■□□□□ 0.6
HOMER3-204ENST00000539827 ATRXP46100 2492 aa18.83■□□□□ 0.6
HOMER3-204ENST00000539827 IGKV1D-17A0A075B6S4 117 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 MPC2O95563 127 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 TNFSF4P23510 183 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 CD80P33681 288 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 CDSNQ15517 529 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 HMGN3Q15651 99 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 NCMAPQ5T1S8 102 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 C6orf183Q5T699 404 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 TMUB2Q71RG4 321 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 LDLRAD3Q86YD5 345 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 TPRX1Q8N7U7 411 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 NEUROG1Q92886 237 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 RNASE6Q93091 150 aaKnown RBP18.82■□□□□ 0.6
HOMER3-204ENST00000539827 GALNT14Q96FL9 552 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 PLPPR2Q96GM1 343 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 NMES1Q9C002 83 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 ZDHHC8Q9ULC8 765 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 SPTA1P02549 2419 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 LHBP01229 141 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 GATA4P43694 442 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 ZNF546Q86UE3 836 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 GPHA2Q96T91 129 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 SHARPINQ9H0F6 387 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 GCM1Q9NP62 436 aa18.82■□□□□ 0.6
HOMER3-204ENST00000539827 ERRFI1Q9UJM3 462 aaPredicted RBP18.82■□□□□ 0.6
HOMER3-204ENST00000539827 PLCE1Q9P212 2302 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 GPR31O00270 319 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 MPPED1O15442 326 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 PHF1O43189 567 aaPredicted RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 SLC25A4P12235 298 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 KRBOX4Q5JUW0 171 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 C2orf50Q96LR7 162 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 MFFQ9GZY8 342 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 ESRP2Q9H6T0 727 aaKnown RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 KCNIP1Q9NZI2 227 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 OR2W1Q9Y3N9 320 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 SHISA9B4DS77 424 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 M0R233 179 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 CYB5R3P00387 301 aaPredicted RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 GLIPR1P48060 266 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 AP2S1P53680 142 aaPredicted RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 CYCSP99999 105 aaKnown RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 TBC1D26Q86UD7 250 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 DMRTC2Q8IXT2 367 aaPredicted RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 ZCCHC24Q8N2G6 241 aaKnown RBP18.81■□□□□ 0.6
HOMER3-204ENST00000539827 OR1L1Q8NH94 360 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 SUCNR1Q9BXA5 334 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 RNF7Q9UBF6 113 aa18.81■□□□□ 0.6
HOMER3-204ENST00000539827 HSPA12AO43301 675 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 PSMB6P28072 239 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 FBXL19-AS1Q494R0 122 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 GGNBP1Q5YKI7 109 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 LIAT1Q6ZQX7 453 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 FAM90A1Q86YD7 464 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 FAM219AQ8IW50 185 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 THAP6Q8TBB0 222 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 TP53RKQ96S44 253 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 GSKIPQ9P0R6 139 aa18.8■□□□□ 0.6
HOMER3-204ENST00000539827 E7EQL1 145 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 EDDM3AQ14507 147 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 TGIF2LYQ8IUE0 185 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 FAM185AQ8N0U4 392 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 MRGPRDQ8TDS7 321 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 GLYATL2Q8WU03 294 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 ARL6Q9H0F7 186 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 MBD2Q9UBB5 411 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 KIAA2026Q5HYC2 2103 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 C3orf85A0A1B0GTC6 90 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 MEX3AA1L020 520 aaKnown RBP18.79■□□□□ 0.6
HOMER3-204ENST00000539827 C12orf77C9JDV5 145 aa18.79■□□□□ 0.6
HOMER3-204ENST00000539827 NPIPB11E5RHQ5 1161 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms