RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CAPSLQ8WWF8 208 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 THRSPQ92748 146 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 RPEQ96AT9 228 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 CREB3L1Q96BA8 519 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 LIN7BQ9HAP6 207 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
RAB40B-202ENST00000538809 A0A1W2PPE3 182 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 G3V4G9 280 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 H0YHG0 523 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 J3QR06 171 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 OR2F2O95006 317 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 OPN1MWP04001 364 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 OPN1MW2P0DN77 364 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 OPN1MW3P0DN78 364 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-202ENST00000538809 DIAPH2-AS1Q14236 149 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 GPR176Q14439 515 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 SPHARQ15513 63 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 ABCA11PQ4W5N1 156 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 FAM27D1Q5T7N8 215 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 MS4A15Q8N5U1 240 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 MRPS24Q96EL2 167 aaKnown RBP11.95□□□□□ -0.5
RAB40B-202ENST00000538809 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 PCDHB16Q9NRJ7 776 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-202ENST00000538809 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
RAB40B-202ENST00000538809 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 ADARB2-AS1A8MUL3 147 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 H3BUI4 141 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 LPLP06858 475 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 CD37P11049 281 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 CRHBPP24387 322 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 MNDAP41218 407 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 GPR50Q13585 617 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 ACSM3Q53FZ2 586 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 AWAT2Q6E213 333 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 ZNF497Q6ZNH5 498 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 LRRTM1Q86UE6 522 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 NDUFA11Q86Y39 141 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 GAPTQ8N292 157 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 TMEM104Q8NE00 496 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 OR10A7Q8NGE5 316 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 OR56B4Q8NH76 319 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 AKR1E2Q96JD6 320 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 RBM14Q96PK6 669 aaKnown RBP11.94□□□□□ -0.5
RAB40B-202ENST00000538809 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 TPRKBQ9Y3C4 175 aa11.94□□□□□ -0.5
RAB40B-202ENST00000538809 A0A1W2PPI3 338 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 OOSP1A8MZH6 123 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 AMY1AP04745 511 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 AMY2AP04746 511 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 TPBGQ13641 420 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 MED22Q15528 200 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 C9orf152Q5JTZ5 239 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 SIGIRRQ6IA17 410 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
RAB40B-202ENST00000538809 IZUMO2Q6UXV1 221 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 PHYHIPQ92561 330 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 R3HDM4Q96D70 268 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 CYYR1Q96J86 154 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 Q96M66 194 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 BANF2Q9H503 90 aa11.93□□□□□ -0.5
RAB40B-202ENST00000538809 IGHV3-43A0A0B4J1X8 118 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 AIPO00170 330 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 RGS10O43665 173 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 MT-ND4P03905 459 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 UCHL1P09936 223 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 IGHV3-43DP0DP04 118 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 MGMTP16455 207 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 MADCAM1Q13477 382 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 SLC16A12Q6ZSM3 486 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 PRSS48Q7RTY5 328 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 OR10X1Q8NGY0 326 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 ARL11Q969Q4 196 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms