RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IAH1Q2TAA2 248 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-205ENST00000538545 CD177Q8N6Q3 437 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 DCUN1D4Q92564 292 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
ACTN1-205ENST00000538545 WFIKKN1Q96NZ8 548 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-205ENST00000538545 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 ZFYVE26Q68DK2 2539 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 NKX2-6A6NCS4 301 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 TMEM210A6NLX4 147 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 FAM90A27PA6NNH2 459 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 DIRAS3O95661 229 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF250P15622 560 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 PSMB6P28072 239 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 GABRA2P47869 451 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 TMEM187Q14656 261 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 DEFB108BQ8NET1 73 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 OR1L1Q8NH94 360 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 MRGPRDQ8TDS7 321 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 DMRTA2Q96SC8 542 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 TAF9BQ9HBM6 251 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 HES4Q9HCC6 221 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 IGHV3-43A0A0B4J1X8 118 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 IGHV3-43DP0DP04 118 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 HLA-DRB3P79483 266 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 CCL8P80075 99 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 OR51H1Q8NH63 302 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 COQ2Q96H96 371 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 TNFSF18Q9UNG2 199 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 CFAP46Q8IYW2 2715 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 DOCK11Q5JSL3 2073 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 HSPA12AO43301 675 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RLN2P04090 185 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 SSTR5P35346 364 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 OR3A1P47881 315 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 LPCAT3Q6P1A2 487 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RND1Q92730 232 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RAB18Q9NP72 206 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RNF150Q9ULK6 438 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 CACNA1BQ00975 2339 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-205ENST00000538545 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
ACTN1-205ENST00000538545 GNMTQ14749 295 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 IZUMO4Q1ZYL8 232 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 Q8IYB0 196 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 FAM169BQ8N8A8 192 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 MSI2Q96DH6 328 aaKnown RBP11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 MEMO1Q9Y316 297 aa11.86□□□□□ -0.51
ACTN1-205ENST00000538545 RAI1Q7Z5J4 1906 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-205ENST00000538545 KIR2DS1A0A191URI9 304 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 DEFB108AA8MXU0 73 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 PSG2P11465 335 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 KIR2DS4P43632 304 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 KCNJ3P48549 501 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 LINC00205P59089 165 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 KIR2DS1Q14954 304 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF767PQ75MW2 155 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 LINC00596Q86U02 117 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 LSM5Q9Y4Y9 91 aaKnown RBP11.85□□□□□ -0.51
ACTN1-205ENST00000538545 IGKV1D-17A0A075B6S4 117 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 MPPED1O15442 326 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 RP2O75695 350 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-205ENST00000538545 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 RPA2P15927 270 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 CD80P33681 288 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-205ENST00000538545 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 SLC38A6Q8IZM9 456 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 SLC35G3Q8N808 338 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 OR52L2PQ8NGH6 319 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 OR1S1Q8NH92 325 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 PPP1R3CQ9UQK1 317 aa11.85□□□□□ -0.51
ACTN1-205ENST00000538545 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 RPS10-NUDT3A0A1W2PQS6 291 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 TUSC2O75896 110 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 OMGP23515 440 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 UTF1Q5T230 341 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 DNAJB11Q9UBS4 358 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 KCNIP3Q9Y2W7 256 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 RBM7Q9Y580 266 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms